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1GZF

Structure of the Clostridium botulinum C3 exoenzyme (wild-type) in complex with NAD

Functional Information from GO Data
ChainGOidnamespacecontents
A0005576cellular_componentextracellular region
A0016757molecular_functionglycosyltransferase activity
A0016763molecular_functionpentosyltransferase activity
A0016779molecular_functionnucleotidyltransferase activity
A1990404molecular_functionNAD+-protein ADP-ribosyltransferase activity
B0005576cellular_componentextracellular region
B0016757molecular_functionglycosyltransferase activity
B0016763molecular_functionpentosyltransferase activity
B0016779molecular_functionnucleotidyltransferase activity
B1990404molecular_functionNAD+-protein ADP-ribosyltransferase activity
C0005576cellular_componentextracellular region
C0016757molecular_functionglycosyltransferase activity
C0016763molecular_functionpentosyltransferase activity
C0016779molecular_functionnucleotidyltransferase activity
C1990404molecular_functionNAD+-protein ADP-ribosyltransferase activity
D0005576cellular_componentextracellular region
D0016757molecular_functionglycosyltransferase activity
D0016763molecular_functionpentosyltransferase activity
D0016779molecular_functionnucleotidyltransferase activity
D1990404molecular_functionNAD+-protein ADP-ribosyltransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues9
DetailsBINDING SITE FOR RESIDUE SO4 A1249
ChainResidue
ALYS56
AASP204
AALA210
AGLY211
AHOH2133
AHOH2166
AHOH2167
AHOH2168
CLYS251

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 B1253
ChainResidue
BALA41
BSER43
BGLU48
BTHR50
BLYS191
BHOH2005

site_idAC3
Number of Residues20
DetailsBINDING SITE FOR RESIDUE NAD A1248
ChainResidue
ATHR80
AASN87
AARG91
AARG128
AGLY129
AASP130
AASP131
AALA133
AARG167
AGLU169
ATHR175
ASER176
APHE183
AARG186
AGLN212
AGLU214
AHOH2160
AHOH2161
AHOH2164
AHOH2165

site_idAC4
Number of Residues17
DetailsBINDING SITE FOR RESIDUE NAD B1252
ChainResidue
BASN87
BARG91
BARG128
BGLY129
BASP130
BASP131
BALA133
BARG167
BGLU169
BSER174
BPHE183
BARG186
BPHE209
BGLY211
BHOH2098
BHOH2124
BHOH2125

site_idAC5
Number of Residues13
DetailsBINDING SITE FOR RESIDUE NIR C1252
ChainResidue
CALA83
CARG128
CGLY129
CSER174
CTHR175
CSER176
CPHE183
CGLY211
CGLU214
CADP1253
CHOH2033
CHOH2087
CHOH2113

site_idAC6
Number of Residues13
DetailsBINDING SITE FOR RESIDUE ADP C1253
ChainResidue
CSER84
CASN87
CARG91
CARG128
CASP130
CASP131
CALA133
CARG167
CGLU169
CARG186
CNIR1252
CHOH2138
CHOH2139

site_idAC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE ADP D1247
ChainResidue
DARG128
DASP130
DASP131
DALA133
DARG167
DGLU169
DARG186

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues12
DetailsACT_SITE: ACT_SITE => ECO:0000255|PROSITE-ProRule:PRU01340
ChainResidueDetails
AARG128
DARG128
DSER174
DGLU214
ASER174
AGLU214
BARG128
BSER174
BGLU214
CARG128
CSER174
CGLU214

site_idSWS_FT_FI2
Number of Residues28
DetailsBINDING: BINDING => ECO:0000269|PubMed:12029083, ECO:0000269|PubMed:16177825
ChainResidueDetails
ATHR80
BARG91
BARG128
BARG167
BPHE183
BGLN212
CTHR80
CASN87
CARG91
CARG128
CARG167
AASN87
CPHE183
CGLN212
DTHR80
DASN87
DARG91
DARG128
DARG167
DPHE183
DGLN212
AARG91
AARG128
AARG167
APHE183
AGLN212
BTHR80
BASN87

site_idSWS_FT_FI3
Number of Residues4
DetailsSITE: Transition state stabilizer
ChainResidueDetails
AGLU214
BGLU214
CGLU214
DGLU214

Catalytic Information from CSA
site_idCSA1
Number of Residues1
DetailsAnnotated By Reference To The Literature 1g24
ChainResidueDetails
AGLU214

site_idCSA2
Number of Residues1
DetailsAnnotated By Reference To The Literature 1g24
ChainResidueDetails
BGLU214

site_idCSA3
Number of Residues1
DetailsAnnotated By Reference To The Literature 1g24
ChainResidueDetails
CGLU214

site_idCSA4
Number of Residues1
DetailsAnnotated By Reference To The Literature 1g24
ChainResidueDetails
DGLU214

site_idMCSA1
Number of Residues2
DetailsM-CSA 824
ChainResidueDetails
ASER174electrostatic stabiliser, polar interaction
AGLU214electrostatic stabiliser, polar interaction, proton acceptor, proton donor

site_idMCSA2
Number of Residues2
DetailsM-CSA 824
ChainResidueDetails
BSER174electrostatic stabiliser, polar interaction
BGLU214electrostatic stabiliser, polar interaction, proton acceptor, proton donor

site_idMCSA3
Number of Residues2
DetailsM-CSA 824
ChainResidueDetails
CSER174electrostatic stabiliser, polar interaction
CGLU214electrostatic stabiliser, polar interaction, proton acceptor, proton donor

site_idMCSA4
Number of Residues2
DetailsM-CSA 824
ChainResidueDetails
DSER174electrostatic stabiliser, polar interaction
DGLU214electrostatic stabiliser, polar interaction, proton acceptor, proton donor

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PDB entries from 2024-08-07

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