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1GYT

E. coli Aminopeptidase A (PepA)

Functional Information from GO Data
ChainGOidnamespacecontents
A0001073molecular_functiontranscription antitermination factor activity, DNA binding
A0003677molecular_functionDNA binding
A0004177molecular_functionaminopeptidase activity
A0005737cellular_componentcytoplasm
A0006276biological_processplasmid maintenance
A0006351biological_processDNA-templated transcription
A0006508biological_processproteolysis
A0008235molecular_functionmetalloexopeptidase activity
A0019538biological_processprotein metabolic process
A0030145molecular_functionmanganese ion binding
A0031564biological_processtranscription antitermination
A0042150biological_processplasmid recombination
A0043171biological_processpeptide catabolic process
A0046872molecular_functionmetal ion binding
A0070006molecular_functionmetalloaminopeptidase activity
B0001073molecular_functiontranscription antitermination factor activity, DNA binding
B0003677molecular_functionDNA binding
B0004177molecular_functionaminopeptidase activity
B0005737cellular_componentcytoplasm
B0006276biological_processplasmid maintenance
B0006351biological_processDNA-templated transcription
B0006508biological_processproteolysis
B0008235molecular_functionmetalloexopeptidase activity
B0019538biological_processprotein metabolic process
B0030145molecular_functionmanganese ion binding
B0031564biological_processtranscription antitermination
B0042150biological_processplasmid recombination
B0043171biological_processpeptide catabolic process
B0046872molecular_functionmetal ion binding
B0070006molecular_functionmetalloaminopeptidase activity
C0001073molecular_functiontranscription antitermination factor activity, DNA binding
C0003677molecular_functionDNA binding
C0004177molecular_functionaminopeptidase activity
C0005737cellular_componentcytoplasm
C0006276biological_processplasmid maintenance
C0006351biological_processDNA-templated transcription
C0006508biological_processproteolysis
C0008235molecular_functionmetalloexopeptidase activity
C0019538biological_processprotein metabolic process
C0030145molecular_functionmanganese ion binding
C0031564biological_processtranscription antitermination
C0042150biological_processplasmid recombination
C0043171biological_processpeptide catabolic process
C0046872molecular_functionmetal ion binding
C0070006molecular_functionmetalloaminopeptidase activity
D0001073molecular_functiontranscription antitermination factor activity, DNA binding
D0003677molecular_functionDNA binding
D0004177molecular_functionaminopeptidase activity
D0005737cellular_componentcytoplasm
D0006276biological_processplasmid maintenance
D0006351biological_processDNA-templated transcription
D0006508biological_processproteolysis
D0008235molecular_functionmetalloexopeptidase activity
D0019538biological_processprotein metabolic process
D0030145molecular_functionmanganese ion binding
D0031564biological_processtranscription antitermination
D0042150biological_processplasmid recombination
D0043171biological_processpeptide catabolic process
D0046872molecular_functionmetal ion binding
D0070006molecular_functionmetalloaminopeptidase activity
E0001073molecular_functiontranscription antitermination factor activity, DNA binding
E0003677molecular_functionDNA binding
E0004177molecular_functionaminopeptidase activity
E0005737cellular_componentcytoplasm
E0006276biological_processplasmid maintenance
E0006351biological_processDNA-templated transcription
E0006508biological_processproteolysis
E0008235molecular_functionmetalloexopeptidase activity
E0019538biological_processprotein metabolic process
E0030145molecular_functionmanganese ion binding
E0031564biological_processtranscription antitermination
E0042150biological_processplasmid recombination
E0043171biological_processpeptide catabolic process
E0046872molecular_functionmetal ion binding
E0070006molecular_functionmetalloaminopeptidase activity
F0001073molecular_functiontranscription antitermination factor activity, DNA binding
F0003677molecular_functionDNA binding
F0004177molecular_functionaminopeptidase activity
F0005737cellular_componentcytoplasm
F0006276biological_processplasmid maintenance
F0006351biological_processDNA-templated transcription
F0006508biological_processproteolysis
F0008235molecular_functionmetalloexopeptidase activity
F0019538biological_processprotein metabolic process
F0030145molecular_functionmanganese ion binding
F0031564biological_processtranscription antitermination
F0042150biological_processplasmid recombination
F0043171biological_processpeptide catabolic process
F0046872molecular_functionmetal ion binding
F0070006molecular_functionmetalloaminopeptidase activity
G0001073molecular_functiontranscription antitermination factor activity, DNA binding
G0003677molecular_functionDNA binding
G0004177molecular_functionaminopeptidase activity
G0005737cellular_componentcytoplasm
G0006276biological_processplasmid maintenance
G0006351biological_processDNA-templated transcription
G0006508biological_processproteolysis
G0008235molecular_functionmetalloexopeptidase activity
G0019538biological_processprotein metabolic process
G0030145molecular_functionmanganese ion binding
G0031564biological_processtranscription antitermination
G0042150biological_processplasmid recombination
G0043171biological_processpeptide catabolic process
G0046872molecular_functionmetal ion binding
G0070006molecular_functionmetalloaminopeptidase activity
H0001073molecular_functiontranscription antitermination factor activity, DNA binding
H0003677molecular_functionDNA binding
H0004177molecular_functionaminopeptidase activity
H0005737cellular_componentcytoplasm
H0006276biological_processplasmid maintenance
H0006351biological_processDNA-templated transcription
H0006508biological_processproteolysis
H0008235molecular_functionmetalloexopeptidase activity
H0019538biological_processprotein metabolic process
H0030145molecular_functionmanganese ion binding
H0031564biological_processtranscription antitermination
H0042150biological_processplasmid recombination
H0043171biological_processpeptide catabolic process
H0046872molecular_functionmetal ion binding
H0070006molecular_functionmetalloaminopeptidase activity
I0001073molecular_functiontranscription antitermination factor activity, DNA binding
I0003677molecular_functionDNA binding
I0004177molecular_functionaminopeptidase activity
I0005737cellular_componentcytoplasm
I0006276biological_processplasmid maintenance
I0006351biological_processDNA-templated transcription
I0006508biological_processproteolysis
I0008235molecular_functionmetalloexopeptidase activity
I0019538biological_processprotein metabolic process
I0030145molecular_functionmanganese ion binding
I0031564biological_processtranscription antitermination
I0042150biological_processplasmid recombination
I0043171biological_processpeptide catabolic process
I0046872molecular_functionmetal ion binding
I0070006molecular_functionmetalloaminopeptidase activity
J0001073molecular_functiontranscription antitermination factor activity, DNA binding
J0003677molecular_functionDNA binding
J0004177molecular_functionaminopeptidase activity
J0005737cellular_componentcytoplasm
J0006276biological_processplasmid maintenance
J0006351biological_processDNA-templated transcription
J0006508biological_processproteolysis
J0008235molecular_functionmetalloexopeptidase activity
J0019538biological_processprotein metabolic process
J0030145molecular_functionmanganese ion binding
J0031564biological_processtranscription antitermination
J0042150biological_processplasmid recombination
J0043171biological_processpeptide catabolic process
J0046872molecular_functionmetal ion binding
J0070006molecular_functionmetalloaminopeptidase activity
K0001073molecular_functiontranscription antitermination factor activity, DNA binding
K0003677molecular_functionDNA binding
K0004177molecular_functionaminopeptidase activity
K0005737cellular_componentcytoplasm
K0006276biological_processplasmid maintenance
K0006351biological_processDNA-templated transcription
K0006508biological_processproteolysis
K0008235molecular_functionmetalloexopeptidase activity
K0019538biological_processprotein metabolic process
K0030145molecular_functionmanganese ion binding
K0031564biological_processtranscription antitermination
K0042150biological_processplasmid recombination
K0043171biological_processpeptide catabolic process
K0046872molecular_functionmetal ion binding
K0070006molecular_functionmetalloaminopeptidase activity
L0001073molecular_functiontranscription antitermination factor activity, DNA binding
L0003677molecular_functionDNA binding
L0004177molecular_functionaminopeptidase activity
L0005737cellular_componentcytoplasm
L0006276biological_processplasmid maintenance
L0006351biological_processDNA-templated transcription
L0006508biological_processproteolysis
L0008235molecular_functionmetalloexopeptidase activity
L0019538biological_processprotein metabolic process
L0030145molecular_functionmanganese ion binding
L0031564biological_processtranscription antitermination
L0042150biological_processplasmid recombination
L0043171biological_processpeptide catabolic process
L0046872molecular_functionmetal ion binding
L0070006molecular_functionmetalloaminopeptidase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ZN A 600
ChainResidue
ALYS270
AASP275
AASP293
AGLU354
AZN602
AHOH760

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN A 601
ChainResidue
AZN601
AHOH760
AASP275
AASP352
AGLU354

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CO3 A 700
ChainResidue
ALYS270
AASP352
AALA353
AGLU354
AGLY355
AARG356
ALEU380

site_idAC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE ZN B 600
ChainResidue
BLYS270
BASP275
BASP293
BGLU354
BZN602
BCO3603
BHOH845

site_idAC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN B 601
ChainResidue
BASP275
BASP352
BGLU354
BZN601
BHOH845

site_idAC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CO3 B 700
ChainResidue
BLYS270
BALA353
BGLU354
BGLY355
BARG356
BLEU380
BZN601

site_idAC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE ZN C 600
ChainResidue
CLYS270
CASP275
CASP293
CGLU354
CZN602
CCO3603
CHOH764

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN C 601
ChainResidue
CASP275
CASP352
CGLU354
CZN601
CHOH764

site_idAC9
Number of Residues8
DetailsBINDING SITE FOR RESIDUE CO3 C 700
ChainResidue
CLYS270
CALA353
CGLU354
CGLY355
CARG356
CLEU380
CZN601
CHOH764

site_idBC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE ZN D 600
ChainResidue
DLYS270
DASP275
DASP293
DGLU354
DZN602
DCO3603
DHOH826

site_idBC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN D 601
ChainResidue
DASP275
DASP352
DGLU354
DZN601
DHOH826

site_idBC3
Number of Residues8
DetailsBINDING SITE FOR RESIDUE CO3 D 700
ChainResidue
DLYS270
DALA353
DGLU354
DGLY355
DARG356
DLEU380
DZN601
DHOH826

site_idBC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ZN E 600
ChainResidue
ELYS270
EASP275
EASP293
EGLU354
EZN602
EHOH778

site_idBC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN E 601
ChainResidue
EASP275
EASP352
EGLU354
EZN601
EHOH778

site_idBC6
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CO3 E 700
ChainResidue
ELYS270
EALA353
EGLU354
EGLY355
EARG356
ELEU380

site_idBC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE ZN F 600
ChainResidue
FCO3603
FHOH862
FLYS270
FASP275
FASP293
FGLU354
FZN602

site_idBC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN F 601
ChainResidue
FASP275
FASP352
FGLU354
FZN601
FHOH862

site_idBC9
Number of Residues9
DetailsBINDING SITE FOR RESIDUE CO3 F 700
ChainResidue
FLYS270
FASP352
FALA353
FGLU354
FGLY355
FARG356
FLEU380
FZN601
FHOH862

site_idCC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ZN G 600
ChainResidue
GLYS270
GASP275
GASP293
GGLU354
GZN602
GHOH855

site_idCC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN G 601
ChainResidue
GASP275
GASP352
GGLU354
GZN601
GHOH855

site_idCC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CO3 G 700
ChainResidue
GLYS270
GALA353
GGLU354
GGLY355
GARG356
GLEU380

site_idCC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE ZN H 600
ChainResidue
HLYS270
HASP275
HASP293
HGLU354
HZN602
HHOH801

site_idCC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN H 601
ChainResidue
HASP275
HASP352
HGLU354
HZN601
HHOH801

site_idCC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CO3 H 700
ChainResidue
HLYS270
HALA353
HGLU354
HGLY355
HARG356
HLEU380
HHOH801

site_idCC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE ZN I 600
ChainResidue
ILYS270
IASP275
IASP293
IGLU354
IZN602
ICO3603
IHOH866

site_idCC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN I 601
ChainResidue
IASP275
IASP352
IGLU354
IZN601
IHOH866

site_idCC9
Number of Residues8
DetailsBINDING SITE FOR RESIDUE CO3 I 700
ChainResidue
ILYS270
IALA353
IGLU354
IGLY355
IARG356
ILEU380
IZN601
IHOH866

site_idDC1
Number of Residues7
DetailsBINDING SITE FOR RESIDUE ZN J 600
ChainResidue
JLYS270
JASP275
JASP293
JGLU354
JZN602
JCO3603
JHOH805

site_idDC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN J 601
ChainResidue
JASP275
JASP352
JGLU354
JZN601
JHOH805

site_idDC3
Number of Residues8
DetailsBINDING SITE FOR RESIDUE CO3 J 700
ChainResidue
JLYS270
JALA353
JGLU354
JGLY355
JARG356
JLEU380
JZN601
JHOH805

site_idDC4
Number of Residues7
DetailsBINDING SITE FOR RESIDUE ZN K 600
ChainResidue
KLYS270
KASP275
KASP293
KGLU354
KZN602
KCO3603
KHOH763

site_idDC5
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN K 601
ChainResidue
KASP275
KASP352
KGLU354
KZN601
KHOH763

site_idDC6
Number of Residues7
DetailsBINDING SITE FOR RESIDUE CO3 K 700
ChainResidue
KLYS270
KALA353
KGLU354
KGLY355
KARG356
KLEU380
KZN601

site_idDC7
Number of Residues7
DetailsBINDING SITE FOR RESIDUE ZN L 600
ChainResidue
LLYS270
LASP275
LASP293
LGLU354
LZN602
LCO3603
LHOH804

site_idDC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE ZN L 601
ChainResidue
LASP275
LASP352
LGLU354
LZN601
LHOH804

site_idDC9
Number of Residues8
DetailsBINDING SITE FOR RESIDUE CO3 L 700
ChainResidue
LLYS270
LALA353
LGLU354
LGLY355
LARG356
LLEU380
LZN601
LHOH804

site_idEC1
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL Z 1
ChainResidue
BARG330

site_idEC2
Number of Residues1
DetailsBINDING SITE FOR RESIDUE CL Z 2
ChainResidue
LARG330

Functional Information from PROSITE/UniProt
site_idPS00631
Number of Residues8
DetailsCYTOSOL_AP Cytosol aminopeptidase signature. NTDAEGRL
ChainResidueDetails
AASN350-LEU357

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues24
DetailsACT_SITE: ACT_SITE => ECO:0000255
ChainResidueDetails
ALYS282
EARG356
FLYS282
FARG356
GLYS282
GARG356
HLYS282
HARG356
ILYS282
IARG356
JLYS282
AARG356
JARG356
KLYS282
KARG356
LLYS282
LARG356
BLYS282
BARG356
CLYS282
CARG356
DLYS282
DARG356
ELYS282

site_idSWS_FT_FI2
Number of Residues60
DetailsBINDING: BINDING => ECO:0000305
ChainResidueDetails
ALYS270
BGLU354
CLYS270
CASP275
CASP293
CASP352
CGLU354
DLYS270
DASP275
DASP293
DASP352
AASP275
DGLU354
ELYS270
EASP275
EASP293
EASP352
EGLU354
FLYS270
FASP275
FASP293
FASP352
AASP293
FGLU354
GLYS270
GASP275
GASP293
GASP352
GGLU354
HLYS270
HASP275
HASP293
HASP352
AASP352
HGLU354
ILYS270
IASP275
IASP293
IASP352
IGLU354
JLYS270
JASP275
JASP293
JASP352
AGLU354
JGLU354
KLYS270
KASP275
KASP293
KASP352
KGLU354
LLYS270
LASP275
LASP293
LASP352
BLYS270
LGLU354
BASP275
BASP293
BASP352

Catalytic Information from CSA
site_idCSA1
Number of Residues3
DetailsAnnotated By Reference To The Literature 1lam
ChainResidueDetails
AARG356
AASP275
ALYS282

site_idCSA10
Number of Residues3
DetailsAnnotated By Reference To The Literature 1lam
ChainResidueDetails
JARG356
JASP275
JLYS282

site_idCSA11
Number of Residues3
DetailsAnnotated By Reference To The Literature 1lam
ChainResidueDetails
KARG356
KASP275
KLYS282

site_idCSA12
Number of Residues3
DetailsAnnotated By Reference To The Literature 1lam
ChainResidueDetails
LARG356
LASP275
LLYS282

site_idCSA2
Number of Residues3
DetailsAnnotated By Reference To The Literature 1lam
ChainResidueDetails
BARG356
BASP275
BLYS282

site_idCSA3
Number of Residues3
DetailsAnnotated By Reference To The Literature 1lam
ChainResidueDetails
CARG356
CASP275
CLYS282

site_idCSA4
Number of Residues3
DetailsAnnotated By Reference To The Literature 1lam
ChainResidueDetails
DARG356
DASP275
DLYS282

site_idCSA5
Number of Residues3
DetailsAnnotated By Reference To The Literature 1lam
ChainResidueDetails
EARG356
EASP275
ELYS282

site_idCSA6
Number of Residues3
DetailsAnnotated By Reference To The Literature 1lam
ChainResidueDetails
FARG356
FASP275
FLYS282

site_idCSA7
Number of Residues3
DetailsAnnotated By Reference To The Literature 1lam
ChainResidueDetails
GARG356
GASP275
GLYS282

site_idCSA8
Number of Residues3
DetailsAnnotated By Reference To The Literature 1lam
ChainResidueDetails
HARG356
HASP275
HLYS282

site_idCSA9
Number of Residues3
DetailsAnnotated By Reference To The Literature 1lam
ChainResidueDetails
IARG356
IASP275
ILYS282

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PDB entries from 2024-07-24

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