Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005216 | molecular_function | monoatomic ion channel activity |
A | 0005515 | molecular_function | protein binding |
A | 0005886 | cellular_component | plasma membrane |
A | 0006811 | biological_process | monoatomic ion transport |
A | 0007602 | biological_process | phototransduction |
A | 0009881 | molecular_function | photoreceptor activity |
A | 0016020 | cellular_component | membrane |
A | 0034220 | biological_process | monoatomic ion transmembrane transport |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 3 |
Details | BINDING SITE FOR RESIDUE CL A 500 |
Chain | Residue |
A | PHE69 |
A | ARG72 |
A | TYR73 |
site_id | AC2 |
Number of Residues | 11 |
Details | BINDING SITE FOR RESIDUE RET A 300 |
Chain | Residue |
A | PRO175 |
A | TRP178 |
A | ASP201 |
A | THR204 |
A | LYS205 |
A | TRP76 |
A | MET109 |
A | GLY112 |
A | PHE134 |
A | TRP171 |
A | TYR174 |
Functional Information from PROSITE/UniProt
site_id | PS00327 |
Number of Residues | 12 |
Details | BACTERIAL_OPSIN_RET Bacterial rhodopsins retinal binding site. IVYLDLvTKvGF |
Chain | Residue | Details |
A | ILE197-PHE208 | |
site_id | PS00950 |
Number of Residues | 13 |
Details | BACTERIAL_OPSIN_1 Bacterial rhodopsins signature 1. RYiDWiLTTPLIV |
Chain | Residue | Details |
A | ARG72-VAL84 | |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 25 |
Details | TOPO_DOM: Extracellular |
Chain | Residue | Details |
A | MET1-GLY3 | |
A | LEU56-PHE69 | |
A | VAL118-ILE121 | |
A | PRO182-THR189 | |
site_id | SWS_FT_FI2 |
Number of Residues | 21 |
Details | TRANSMEM: Helical; Name=Helix A |
Chain | Residue | Details |
A | LEU4-ALA25 | |
site_id | SWS_FT_FI3 |
Number of Residues | 28 |
Details | TOPO_DOM: Cytoplasmic |
Chain | Residue | Details |
A | GLY26-GLU33 | |
A | GLY92-ASP94 | |
A | SER150-SER153 | |
A | HIS223-ASP239 | |
site_id | SWS_FT_FI4 |
Number of Residues | 21 |
Details | TRANSMEM: Helical; Name=Helix B |
Chain | Residue | Details |
A | ARG34-ALA55 | |
site_id | SWS_FT_FI5 |
Number of Residues | 21 |
Details | TRANSMEM: Helical; Name=Helix C |
Chain | Residue | Details |
A | ALA70-ALA91 | |
site_id | SWS_FT_FI6 |
Number of Residues | 22 |
Details | TRANSMEM: Helical; Name=Helix D |
Chain | Residue | Details |
A | SER95-MET117 | |
site_id | SWS_FT_FI7 |
Number of Residues | 27 |
Details | TRANSMEM: Helical; Name=Helix E |
Chain | Residue | Details |
A | GLU122-ALA149 | |
site_id | SWS_FT_FI8 |
Number of Residues | 27 |
Details | TRANSMEM: Helical; Name=Helix F |
Chain | Residue | Details |
A | SER154-GLY181 | |
site_id | SWS_FT_FI9 |
Number of Residues | 32 |
Details | TRANSMEM: Helical; Name=Helix G |
Chain | Residue | Details |
A | PRO190-GLU222 | |
site_id | SWS_FT_FI10 |
Number of Residues | 1 |
Details | MOD_RES: N6-(retinylidene)lysine |
Chain | Residue | Details |
A | LYS205 | |