1GU0
CRYSTAL STRUCTURE OF TYPE II DEHYDROQUINASE FROM STREPTOMYCES COELICOLOR
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003855 | molecular_function | 3-dehydroquinate dehydratase activity |
A | 0008652 | biological_process | amino acid biosynthetic process |
A | 0009073 | biological_process | aromatic amino acid family biosynthetic process |
A | 0009423 | biological_process | chorismate biosynthetic process |
A | 0016829 | molecular_function | lyase activity |
A | 0019631 | biological_process | quinate catabolic process |
B | 0003855 | molecular_function | 3-dehydroquinate dehydratase activity |
B | 0008652 | biological_process | amino acid biosynthetic process |
B | 0009073 | biological_process | aromatic amino acid family biosynthetic process |
B | 0009423 | biological_process | chorismate biosynthetic process |
B | 0016829 | molecular_function | lyase activity |
B | 0019631 | biological_process | quinate catabolic process |
C | 0003855 | molecular_function | 3-dehydroquinate dehydratase activity |
C | 0008652 | biological_process | amino acid biosynthetic process |
C | 0009073 | biological_process | aromatic amino acid family biosynthetic process |
C | 0009423 | biological_process | chorismate biosynthetic process |
C | 0016829 | molecular_function | lyase activity |
C | 0019631 | biological_process | quinate catabolic process |
D | 0003855 | molecular_function | 3-dehydroquinate dehydratase activity |
D | 0008652 | biological_process | amino acid biosynthetic process |
D | 0009073 | biological_process | aromatic amino acid family biosynthetic process |
D | 0009423 | biological_process | chorismate biosynthetic process |
D | 0016829 | molecular_function | lyase activity |
D | 0019631 | biological_process | quinate catabolic process |
E | 0003855 | molecular_function | 3-dehydroquinate dehydratase activity |
E | 0008652 | biological_process | amino acid biosynthetic process |
E | 0009073 | biological_process | aromatic amino acid family biosynthetic process |
E | 0009423 | biological_process | chorismate biosynthetic process |
E | 0016829 | molecular_function | lyase activity |
E | 0019631 | biological_process | quinate catabolic process |
F | 0003855 | molecular_function | 3-dehydroquinate dehydratase activity |
F | 0008652 | biological_process | amino acid biosynthetic process |
F | 0009073 | biological_process | aromatic amino acid family biosynthetic process |
F | 0009423 | biological_process | chorismate biosynthetic process |
F | 0016829 | molecular_function | lyase activity |
F | 0019631 | biological_process | quinate catabolic process |
G | 0003855 | molecular_function | 3-dehydroquinate dehydratase activity |
G | 0008652 | biological_process | amino acid biosynthetic process |
G | 0009073 | biological_process | aromatic amino acid family biosynthetic process |
G | 0009423 | biological_process | chorismate biosynthetic process |
G | 0016829 | molecular_function | lyase activity |
G | 0019631 | biological_process | quinate catabolic process |
H | 0003855 | molecular_function | 3-dehydroquinate dehydratase activity |
H | 0008652 | biological_process | amino acid biosynthetic process |
H | 0009073 | biological_process | aromatic amino acid family biosynthetic process |
H | 0009423 | biological_process | chorismate biosynthetic process |
H | 0016829 | molecular_function | lyase activity |
H | 0019631 | biological_process | quinate catabolic process |
I | 0003855 | molecular_function | 3-dehydroquinate dehydratase activity |
I | 0008652 | biological_process | amino acid biosynthetic process |
I | 0009073 | biological_process | aromatic amino acid family biosynthetic process |
I | 0009423 | biological_process | chorismate biosynthetic process |
I | 0016829 | molecular_function | lyase activity |
I | 0019631 | biological_process | quinate catabolic process |
J | 0003855 | molecular_function | 3-dehydroquinate dehydratase activity |
J | 0008652 | biological_process | amino acid biosynthetic process |
J | 0009073 | biological_process | aromatic amino acid family biosynthetic process |
J | 0009423 | biological_process | chorismate biosynthetic process |
J | 0016829 | molecular_function | lyase activity |
J | 0019631 | biological_process | quinate catabolic process |
K | 0003855 | molecular_function | 3-dehydroquinate dehydratase activity |
K | 0008652 | biological_process | amino acid biosynthetic process |
K | 0009073 | biological_process | aromatic amino acid family biosynthetic process |
K | 0009423 | biological_process | chorismate biosynthetic process |
K | 0016829 | molecular_function | lyase activity |
K | 0019631 | biological_process | quinate catabolic process |
L | 0003855 | molecular_function | 3-dehydroquinate dehydratase activity |
L | 0008652 | biological_process | amino acid biosynthetic process |
L | 0009073 | biological_process | aromatic amino acid family biosynthetic process |
L | 0009423 | biological_process | chorismate biosynthetic process |
L | 0016829 | molecular_function | lyase activity |
L | 0019631 | biological_process | quinate catabolic process |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE TRS A 200 |
Chain | Residue |
A | GLU59 |
A | THR86 |
A | SER87 |
B | GLU59 |
B | THR86 |
B | SER87 |
C | GLU59 |
C | THR86 |
C | SER87 |
site_id | AC2 |
Number of Residues | 6 |
Details | BINDING SITE FOR RESIDUE TRS D 200 |
Chain | Residue |
D | GLU59 |
D | THR86 |
E | GLU59 |
E | THR86 |
F | GLU59 |
F | THR86 |
site_id | AC3 |
Number of Residues | 9 |
Details | BINDING SITE FOR RESIDUE TRS G 200 |
Chain | Residue |
G | GLU59 |
G | THR86 |
G | SER87 |
H | GLU59 |
H | THR86 |
H | SER87 |
I | GLU59 |
I | THR86 |
I | SER87 |
site_id | AC4 |
Number of Residues | 8 |
Details | BINDING SITE FOR RESIDUE TRS J 200 |
Chain | Residue |
J | GLU59 |
J | THR86 |
J | SER87 |
K | GLU59 |
K | THR86 |
K | SER87 |
L | GLU59 |
L | THR86 |
Functional Information from PROSITE/UniProt
site_id | PS01029 |
Number of Residues | 18 |
Details | DEHYDROQUINASE_II Dehydroquinase class II signature. LNGPNLnlLGqRQpeiYG |
Chain | Residue | Details |
A | LEU12-GLY29 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 12 |
Details | Active site: {"description":"Proton acceptor"} |
Chain | Residue | Details |
site_id | SWS_FT_FI2 |
Number of Residues | 12 |
Details | Active site: {"description":"Proton donor"} |
Chain | Residue | Details |
site_id | SWS_FT_FI3 |
Number of Residues | 60 |
Details | Binding site: {} |
Chain | Residue | Details |
site_id | SWS_FT_FI4 |
Number of Residues | 12 |
Details | Site: {"description":"Transition state stabilizer"} |
Chain | Residue | Details |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 6 |
Details | Annotated By Reference To The Literature 1uqr |
Chain | Residue | Details |
A | ARG113 | |
A | TYR28 | |
A | GLU104 | |
A | HIS106 | |
A | ASN16 | |
A | ARG23 |
site_id | CSA10 |
Number of Residues | 6 |
Details | Annotated By Reference To The Literature 1uqr |
Chain | Residue | Details |
J | ARG113 | |
J | TYR28 | |
J | GLU104 | |
J | HIS106 | |
J | ASN16 | |
J | ARG23 |
site_id | CSA11 |
Number of Residues | 6 |
Details | Annotated By Reference To The Literature 1uqr |
Chain | Residue | Details |
K | ARG113 | |
K | TYR28 | |
K | GLU104 | |
K | HIS106 | |
K | ASN16 | |
K | ARG23 |
site_id | CSA12 |
Number of Residues | 6 |
Details | Annotated By Reference To The Literature 1uqr |
Chain | Residue | Details |
L | ARG113 | |
L | TYR28 | |
L | GLU104 | |
L | HIS106 | |
L | ASN16 | |
L | ARG23 |
site_id | CSA2 |
Number of Residues | 6 |
Details | Annotated By Reference To The Literature 1uqr |
Chain | Residue | Details |
B | ARG113 | |
B | TYR28 | |
B | GLU104 | |
B | HIS106 | |
B | ASN16 | |
B | ARG23 |
site_id | CSA3 |
Number of Residues | 6 |
Details | Annotated By Reference To The Literature 1uqr |
Chain | Residue | Details |
C | ARG113 | |
C | TYR28 | |
C | GLU104 | |
C | HIS106 | |
C | ASN16 | |
C | ARG23 |
site_id | CSA4 |
Number of Residues | 6 |
Details | Annotated By Reference To The Literature 1uqr |
Chain | Residue | Details |
D | ARG113 | |
D | TYR28 | |
D | GLU104 | |
D | HIS106 | |
D | ASN16 | |
D | ARG23 |
site_id | CSA5 |
Number of Residues | 6 |
Details | Annotated By Reference To The Literature 1uqr |
Chain | Residue | Details |
E | ARG113 | |
E | TYR28 | |
E | GLU104 | |
E | HIS106 | |
E | ASN16 | |
E | ARG23 |
site_id | CSA6 |
Number of Residues | 6 |
Details | Annotated By Reference To The Literature 1uqr |
Chain | Residue | Details |
F | ARG113 | |
F | TYR28 | |
F | GLU104 | |
F | HIS106 | |
F | ASN16 | |
F | ARG23 |
site_id | CSA7 |
Number of Residues | 6 |
Details | Annotated By Reference To The Literature 1uqr |
Chain | Residue | Details |
G | ARG113 | |
G | TYR28 | |
G | GLU104 | |
G | HIS106 | |
G | ASN16 | |
G | ARG23 |
site_id | CSA8 |
Number of Residues | 6 |
Details | Annotated By Reference To The Literature 1uqr |
Chain | Residue | Details |
H | ARG113 | |
H | TYR28 | |
H | GLU104 | |
H | HIS106 | |
H | ASN16 | |
H | ARG23 |
site_id | CSA9 |
Number of Residues | 6 |
Details | Annotated By Reference To The Literature 1uqr |
Chain | Residue | Details |
I | ARG113 | |
I | TYR28 | |
I | GLU104 | |
I | HIS106 | |
I | ASN16 | |
I | ARG23 |
site_id | MCSA1 |
Number of Residues | 9 |
Details | M-CSA 55 |
Chain | Residue | Details |
A | PRO15 | activator, hydrogen bond acceptor, steric role |
A | ASN16 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
A | ARG23 | activator, attractive charge-charge interaction, electrostatic stabiliser, polar interaction |
A | TYR28 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
A | ASN79 | hydrogen bond acceptor, steric role |
A | ALA82 | activator, hydrogen bond donor, steric role |
A | GLU104 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
A | HIS106 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay |
A | ARG113 | activator, attractive charge-charge interaction, electrostatic stabiliser, polar interaction |
site_id | MCSA10 |
Number of Residues | 9 |
Details | M-CSA 55 |
Chain | Residue | Details |
J | PRO15 | activator, hydrogen bond acceptor, steric role |
J | ASN16 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
J | ARG23 | activator, attractive charge-charge interaction, electrostatic stabiliser, polar interaction |
J | TYR28 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
J | ASN79 | hydrogen bond acceptor, steric role |
J | ALA82 | activator, hydrogen bond donor, steric role |
J | GLU104 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
J | HIS106 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay |
J | ARG113 | activator, attractive charge-charge interaction, electrostatic stabiliser, polar interaction |
site_id | MCSA11 |
Number of Residues | 9 |
Details | M-CSA 55 |
Chain | Residue | Details |
K | PRO15 | activator, hydrogen bond acceptor, steric role |
K | ASN16 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
K | ARG23 | activator, attractive charge-charge interaction, electrostatic stabiliser, polar interaction |
K | TYR28 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
K | ASN79 | hydrogen bond acceptor, steric role |
K | ALA82 | activator, hydrogen bond donor, steric role |
K | GLU104 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
K | HIS106 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay |
K | ARG113 | activator, attractive charge-charge interaction, electrostatic stabiliser, polar interaction |
site_id | MCSA12 |
Number of Residues | 9 |
Details | M-CSA 55 |
Chain | Residue | Details |
L | PRO15 | activator, hydrogen bond acceptor, steric role |
L | ASN16 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
L | ARG23 | activator, attractive charge-charge interaction, electrostatic stabiliser, polar interaction |
L | TYR28 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
L | ASN79 | hydrogen bond acceptor, steric role |
L | ALA82 | activator, hydrogen bond donor, steric role |
L | GLU104 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
L | HIS106 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay |
L | ARG113 | activator, attractive charge-charge interaction, electrostatic stabiliser, polar interaction |
site_id | MCSA2 |
Number of Residues | 9 |
Details | M-CSA 55 |
Chain | Residue | Details |
B | PRO15 | activator, hydrogen bond acceptor, steric role |
B | ASN16 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
B | ARG23 | activator, attractive charge-charge interaction, electrostatic stabiliser, polar interaction |
B | TYR28 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
B | ASN79 | hydrogen bond acceptor, steric role |
B | ALA82 | activator, hydrogen bond donor, steric role |
B | GLU104 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
B | HIS106 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay |
B | ARG113 | activator, attractive charge-charge interaction, electrostatic stabiliser, polar interaction |
site_id | MCSA3 |
Number of Residues | 9 |
Details | M-CSA 55 |
Chain | Residue | Details |
C | PRO15 | activator, hydrogen bond acceptor, steric role |
C | ASN16 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
C | ARG23 | activator, attractive charge-charge interaction, electrostatic stabiliser, polar interaction |
C | TYR28 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
C | ASN79 | hydrogen bond acceptor, steric role |
C | ALA82 | activator, hydrogen bond donor, steric role |
C | GLU104 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
C | HIS106 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay |
C | ARG113 | activator, attractive charge-charge interaction, electrostatic stabiliser, polar interaction |
site_id | MCSA4 |
Number of Residues | 9 |
Details | M-CSA 55 |
Chain | Residue | Details |
D | PRO15 | activator, hydrogen bond acceptor, steric role |
D | ASN16 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
D | ARG23 | activator, attractive charge-charge interaction, electrostatic stabiliser, polar interaction |
D | TYR28 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
D | ASN79 | hydrogen bond acceptor, steric role |
D | ALA82 | activator, hydrogen bond donor, steric role |
D | GLU104 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
D | HIS106 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay |
D | ARG113 | activator, attractive charge-charge interaction, electrostatic stabiliser, polar interaction |
site_id | MCSA5 |
Number of Residues | 9 |
Details | M-CSA 55 |
Chain | Residue | Details |
E | PRO15 | activator, hydrogen bond acceptor, steric role |
E | ASN16 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
E | ARG23 | activator, attractive charge-charge interaction, electrostatic stabiliser, polar interaction |
E | TYR28 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
E | ASN79 | hydrogen bond acceptor, steric role |
E | ALA82 | activator, hydrogen bond donor, steric role |
E | GLU104 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
E | HIS106 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay |
E | ARG113 | activator, attractive charge-charge interaction, electrostatic stabiliser, polar interaction |
site_id | MCSA6 |
Number of Residues | 9 |
Details | M-CSA 55 |
Chain | Residue | Details |
F | PRO15 | activator, hydrogen bond acceptor, steric role |
F | ASN16 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
F | ARG23 | activator, attractive charge-charge interaction, electrostatic stabiliser, polar interaction |
F | TYR28 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
F | ASN79 | hydrogen bond acceptor, steric role |
F | ALA82 | activator, hydrogen bond donor, steric role |
F | GLU104 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
F | HIS106 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay |
F | ARG113 | activator, attractive charge-charge interaction, electrostatic stabiliser, polar interaction |
site_id | MCSA7 |
Number of Residues | 9 |
Details | M-CSA 55 |
Chain | Residue | Details |
G | PRO15 | activator, hydrogen bond acceptor, steric role |
G | ASN16 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
G | ARG23 | activator, attractive charge-charge interaction, electrostatic stabiliser, polar interaction |
G | TYR28 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
G | ASN79 | hydrogen bond acceptor, steric role |
G | ALA82 | activator, hydrogen bond donor, steric role |
G | GLU104 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
G | HIS106 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay |
G | ARG113 | activator, attractive charge-charge interaction, electrostatic stabiliser, polar interaction |
site_id | MCSA8 |
Number of Residues | 9 |
Details | M-CSA 55 |
Chain | Residue | Details |
H | PRO15 | activator, hydrogen bond acceptor, steric role |
H | ASN16 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
H | ARG23 | activator, attractive charge-charge interaction, electrostatic stabiliser, polar interaction |
H | TYR28 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
H | ASN79 | hydrogen bond acceptor, steric role |
H | ALA82 | activator, hydrogen bond donor, steric role |
H | GLU104 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
H | HIS106 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay |
H | ARG113 | activator, attractive charge-charge interaction, electrostatic stabiliser, polar interaction |
site_id | MCSA9 |
Number of Residues | 9 |
Details | M-CSA 55 |
Chain | Residue | Details |
I | PRO15 | activator, hydrogen bond acceptor, steric role |
I | ASN16 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
I | ARG23 | activator, attractive charge-charge interaction, electrostatic stabiliser, polar interaction |
I | TYR28 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
I | ASN79 | hydrogen bond acceptor, steric role |
I | ALA82 | activator, hydrogen bond donor, steric role |
I | GLU104 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
I | HIS106 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay |
I | ARG113 | activator, attractive charge-charge interaction, electrostatic stabiliser, polar interaction |