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1GMZ

Crystal structure of the D49 phospholipase A2 piratoxin III from Bothrops pirajai.

Functional Information from GO Data
ChainGOidnamespacecontents
A0004623molecular_functionphospholipase A2 activity
A0005509molecular_functioncalcium ion binding
A0006644biological_processphospholipid metabolic process
A0016042biological_processlipid catabolic process
A0050482biological_processarachidonic acid secretion
B0004623molecular_functionphospholipase A2 activity
B0005509molecular_functioncalcium ion binding
B0006644biological_processphospholipid metabolic process
B0016042biological_processlipid catabolic process
B0050482biological_processarachidonic acid secretion
Functional Information from PDB Data
site_idAC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE IPA A 200
ChainResidue
APHE5
ATYR21

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE IPA B 200
ChainResidue
BPHE5
BTYR21
BVAL22

Functional Information from PROSITE/UniProt
site_idPS00118
Number of Residues8
DetailsPA2_HIS Phospholipase A2 histidine active site. CCFvHDcC
ChainResidueDetails
ACYS43-CYS50

site_idPS00119
Number of Residues11
DetailsPA2_ASP Phospholipase A2 aspartic acid active site. ICECDKAAaVC
ChainResidueDetails
AILE85-CYS95

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsSITE: Putative membrane-disrupting site (MDiS) => ECO:0000250|UniProtKB:P20474
ChainResidueDetails
ATRP3
ALEU10
ALYS15
ALEU16
BTRP3
BLEU10
BLYS15
BLEU16

site_idSWS_FT_FI2
Number of Residues2
DetailsSITE: Putative cationic membrane-docking site (MDoS) => ECO:0000250|UniProtKB:P20474
ChainResidueDetails
ATYR64
BTYR64

site_idSWS_FT_FI3
Number of Residues4
DetailsSITE: Important residue of the cationic membrane-docking site (MDoS) => ECO:0000250|UniProtKB:I6L8L6
ChainResidueDetails
ALYS105
AMET108
BLYS105
BMET108

site_idSWS_FT_FI4
Number of Residues2
DetailsSITE: Hydrophobic membrane-disruption site (MDiS) => ECO:0000250|UniProtKB:I6L8L6
ChainResidueDetails
ALEU111
BLEU111

site_idSWS_FT_FI5
Number of Residues2
DetailsSITE: Cationic membrane-docking site (MDoS) => ECO:0000250|UniProtKB:I6L8L6
ChainResidueDetails
ALYS112
BLYS112

220472

PDB entries from 2024-05-29

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