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1GL9

Archaeoglobus fulgidus reverse gyrase complexed with ADPNP

Functional Information from GO Data
ChainGOidnamespacecontents
B0003676molecular_functionnucleic acid binding
B0003677molecular_functionDNA binding
B0003916molecular_functionDNA topoisomerase activity
B0003918molecular_functionDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
B0005524molecular_functionATP binding
B0005737cellular_componentcytoplasm
B0006265biological_processDNA topological change
B0006268biological_processDNA unwinding involved in DNA replication
B0008094molecular_functionATP-dependent activity, acting on DNA
B0008270molecular_functionzinc ion binding
B0016887molecular_functionATP hydrolysis activity
B0046872molecular_functionmetal ion binding
B0160097molecular_functionreverse gyrase activity
C0003676molecular_functionnucleic acid binding
C0003677molecular_functionDNA binding
C0003916molecular_functionDNA topoisomerase activity
C0003918molecular_functionDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
C0005524molecular_functionATP binding
C0005737cellular_componentcytoplasm
C0006265biological_processDNA topological change
C0006268biological_processDNA unwinding involved in DNA replication
C0008094molecular_functionATP-dependent activity, acting on DNA
C0008270molecular_functionzinc ion binding
C0016887molecular_functionATP hydrolysis activity
C0046872molecular_functionmetal ion binding
C0160097molecular_functionreverse gyrase activity
Functional Information from PDB Data
site_idAC1
Number of Residues2
DetailsBINDING SITE FOR RESIDUE MG B2056
ChainResidue
BTHR85
BASP182

site_idAC2
Number of Residues1
DetailsBINDING SITE FOR RESIDUE MG C2056
ChainResidue
CTHR85

site_idAC3
Number of Residues13
DetailsBINDING SITE FOR RESIDUE ANP B2055
ChainResidue
BVAL82
BGLY83
BLYS84
BTHR85
BSER86
BARG498
BGLN499
BPHE50
BVAL54
BGLU56
BARG58
BGLN61
BGLY81

site_idAC4
Number of Residues12
DetailsBINDING SITE FOR RESIDUE ANP C2055
ChainResidue
CPHE50
CVAL54
CGLU56
CGLN61
CGLY81
CVAL82
CGLY83
CLYS84
CTHR85
CSER86
CARG498
CGLN499

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues84
DetailsZN_FING: RG N-terminal-type => ECO:0000255|PROSITE-ProRule:PRU01380
ChainResidueDetails
BMET1-LEU43
CMET1-LEU43

site_idSWS_FT_FI2
Number of Residues56
DetailsZN_FING: RG C-terminal-type => ECO:0000255|PROSITE-ProRule:PRU01381
ChainResidueDetails
BILE581-SER609
CILE581-SER609

site_idSWS_FT_FI3
Number of Residues2
DetailsACT_SITE: O-(5'-phospho-DNA)-tyrosine intermediate => ECO:0000255|PROSITE-ProRule:PRU01383
ChainResidueDetails
BTYR809
CTYR809

site_idSWS_FT_FI4
Number of Residues8
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU01380
ChainResidueDetails
BCYS10
BCYS13
BCYS27
BCYS35
CCYS10
CCYS13
CCYS27
CCYS35

site_idSWS_FT_FI5
Number of Residues2
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01125, ECO:0000305|PubMed:11823434
ChainResidueDetails
BGLN61
CGLN61

site_idSWS_FT_FI6
Number of Residues6
DetailsBINDING: BINDING => ECO:0000305|PubMed:11823434
ChainResidueDetails
BLYS84
BTHR85
BSER86
CLYS84
CTHR85
CSER86

site_idSWS_FT_FI7
Number of Residues12
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01125
ChainResidueDetails
BGLU512
CCYS598
CCYS601
CASP631
BCYS584
BCYS587
BCYS598
BCYS601
BASP631
CGLU512
CCYS584
CCYS587

Catalytic Information from CSA
site_idCSA1
Number of Residues4
DetailsAnnotated By Reference To The Literature 1ecl
ChainResidueDetails
BGLU512
BHIS844
BTYR809
BASP631

site_idCSA2
Number of Residues4
DetailsAnnotated By Reference To The Literature 1ecl
ChainResidueDetails
CGLU512
CHIS844
CTYR809
CASP631

225946

PDB entries from 2024-10-09

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