1GL9
Archaeoglobus fulgidus reverse gyrase complexed with ADPNP
Functional Information from GO Data
Chain | GOid | namespace | contents |
B | 0003676 | molecular_function | nucleic acid binding |
B | 0003677 | molecular_function | DNA binding |
B | 0003916 | molecular_function | DNA topoisomerase activity |
B | 0003918 | molecular_function | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity |
B | 0005524 | molecular_function | ATP binding |
B | 0005737 | cellular_component | cytoplasm |
B | 0006265 | biological_process | DNA topological change |
B | 0006268 | biological_process | DNA unwinding involved in DNA replication |
B | 0008094 | molecular_function | ATP-dependent activity, acting on DNA |
B | 0008270 | molecular_function | zinc ion binding |
B | 0016887 | molecular_function | ATP hydrolysis activity |
B | 0046872 | molecular_function | metal ion binding |
B | 0160097 | molecular_function | reverse gyrase activity |
C | 0003676 | molecular_function | nucleic acid binding |
C | 0003677 | molecular_function | DNA binding |
C | 0003916 | molecular_function | DNA topoisomerase activity |
C | 0003918 | molecular_function | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity |
C | 0005524 | molecular_function | ATP binding |
C | 0005737 | cellular_component | cytoplasm |
C | 0006265 | biological_process | DNA topological change |
C | 0006268 | biological_process | DNA unwinding involved in DNA replication |
C | 0008094 | molecular_function | ATP-dependent activity, acting on DNA |
C | 0008270 | molecular_function | zinc ion binding |
C | 0016887 | molecular_function | ATP hydrolysis activity |
C | 0046872 | molecular_function | metal ion binding |
C | 0160097 | molecular_function | reverse gyrase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 2 |
Details | BINDING SITE FOR RESIDUE MG B2056 |
Chain | Residue |
B | THR85 |
B | ASP182 |
site_id | AC2 |
Number of Residues | 1 |
Details | BINDING SITE FOR RESIDUE MG C2056 |
Chain | Residue |
C | THR85 |
site_id | AC3 |
Number of Residues | 13 |
Details | BINDING SITE FOR RESIDUE ANP B2055 |
Chain | Residue |
B | VAL82 |
B | GLY83 |
B | LYS84 |
B | THR85 |
B | SER86 |
B | ARG498 |
B | GLN499 |
B | PHE50 |
B | VAL54 |
B | GLU56 |
B | ARG58 |
B | GLN61 |
B | GLY81 |
site_id | AC4 |
Number of Residues | 12 |
Details | BINDING SITE FOR RESIDUE ANP C2055 |
Chain | Residue |
C | PHE50 |
C | VAL54 |
C | GLU56 |
C | GLN61 |
C | GLY81 |
C | VAL82 |
C | GLY83 |
C | LYS84 |
C | THR85 |
C | SER86 |
C | ARG498 |
C | GLN499 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 84 |
Details | ZN_FING: RG N-terminal-type => ECO:0000255|PROSITE-ProRule:PRU01380 |
Chain | Residue | Details |
B | MET1-LEU43 | |
C | MET1-LEU43 |
site_id | SWS_FT_FI2 |
Number of Residues | 56 |
Details | ZN_FING: RG C-terminal-type => ECO:0000255|PROSITE-ProRule:PRU01381 |
Chain | Residue | Details |
B | ILE581-SER609 | |
C | ILE581-SER609 |
site_id | SWS_FT_FI3 |
Number of Residues | 2 |
Details | ACT_SITE: O-(5'-phospho-DNA)-tyrosine intermediate => ECO:0000255|PROSITE-ProRule:PRU01383 |
Chain | Residue | Details |
B | TYR809 | |
C | TYR809 |
site_id | SWS_FT_FI4 |
Number of Residues | 8 |
Details | BINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU01380 |
Chain | Residue | Details |
B | CYS10 | |
B | CYS13 | |
B | CYS27 | |
B | CYS35 | |
C | CYS10 | |
C | CYS13 | |
C | CYS27 | |
C | CYS35 |
site_id | SWS_FT_FI5 |
Number of Residues | 2 |
Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01125, ECO:0000305|PubMed:11823434 |
Chain | Residue | Details |
B | GLN61 | |
C | GLN61 |
site_id | SWS_FT_FI6 |
Number of Residues | 6 |
Details | BINDING: BINDING => ECO:0000305|PubMed:11823434 |
Chain | Residue | Details |
B | LYS84 | |
B | THR85 | |
B | SER86 | |
C | LYS84 | |
C | THR85 | |
C | SER86 |
site_id | SWS_FT_FI7 |
Number of Residues | 12 |
Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_01125 |
Chain | Residue | Details |
B | GLU512 | |
C | CYS598 | |
C | CYS601 | |
C | ASP631 | |
B | CYS584 | |
B | CYS587 | |
B | CYS598 | |
B | CYS601 | |
B | ASP631 | |
C | GLU512 | |
C | CYS584 | |
C | CYS587 |
Catalytic Information from CSA
site_id | CSA1 |
Number of Residues | 4 |
Details | Annotated By Reference To The Literature 1ecl |
Chain | Residue | Details |
B | GLU512 | |
B | HIS844 | |
B | TYR809 | |
B | ASP631 |
site_id | CSA2 |
Number of Residues | 4 |
Details | Annotated By Reference To The Literature 1ecl |
Chain | Residue | Details |
C | GLU512 | |
C | HIS844 | |
C | TYR809 | |
C | ASP631 |