1GDK

CRYSTAL STRUCTURE OF FERRIC COMPLEXES OF THE YELLOW LUPIN LEGHEMOGLOBIN WITH ISOQUINOLINE AT 1.8 ANGSTROMS RESOLUTION (RUSSIAN)

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005344	molecular_function	oxygen carrier activity
A	0005634	cellular_component	nucleus
A	0005829	cellular_component	cytosol
A	0009877	biological_process	nodulation
A	0010167	biological_process	response to nitrate
A	0015671	biological_process	oxygen transport
A	0019825	molecular_function	oxygen binding
A	0020037	molecular_function	heme binding
A	0046872	molecular_function	metal ion binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	14
Details	BINDING SITE FOR RESIDUE HEM A 154

Chain	Residue
A	LEU43
A	HOH170
A	HOH356
A	HOH378
A	HOH404
A	ISQ500
A	PHE44
A	SER45
A	HIS97
A	LYS100
A	HIS106
A	PHE107
A	VAL110
A	TYR138

---

site_id	AC2
Number of Residues	7
Details	BINDING SITE FOR RESIDUE ISQ A 500

Chain	Residue
A	PHE29
A	PHE30
A	HIS63
A	VAL67
A	VAL110
A	HEM154
A	HOH170

---

Functional Information from PROSITE/UniProt

site_id	PS00208
Number of Residues	12
Details	PLANT_GLOBIN Plant hemoglobins signature. NPeLqaHAgkvF

Chain	Residue	Details
A	ASN57-PHE68

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	148
Details	Domain: {"description":"Globin","evidences":[{"source":"PROSITE-ProRule","id":"PRU00238","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	1
Details	Binding site: {"evidences":[{"source":"PubMed","id":"7643380","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"8950274","evidenceCode":"ECO:0000269"},{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"journal article","publicationDate":"1980","firstPage":"43","lastPage":"52","volume":"25","journal":"Sov. Phys. Crystallogr.","title":"X-ray structural investigation of leghemoglobin. VI. Structure of acetate-ferrileghemoglobin at a resolution of 2.0 A.","authors":["Arutiunian E.G.","Kuranova I.P.","Vainshtein B.K.","Steigemann W."]}},{"source":"PDB","id":"1GDI","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1GDJ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1GDK","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1GDL","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1LH1","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1LH2","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1LH3","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1LH5","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1LH6","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1LH7","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2GDM","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2LH1","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2LH2","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2LH3","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2LH5","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2LH6","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2LH7","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	1
Details	Binding site: {"evidences":[{"source":"PubMed","id":"7643380","evidenceCode":"ECO:0000269"},{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"journal article","publicationDate":"1980","firstPage":"43","lastPage":"52","volume":"25","journal":"Sov. Phys. Crystallogr.","title":"X-ray structural investigation of leghemoglobin. VI. Structure of acetate-ferrileghemoglobin at a resolution of 2.0 A.","authors":["Arutiunian E.G.","Kuranova I.P.","Vainshtein B.K.","Steigemann W."]}},{"source":"PDB","id":"2GDM","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2LH2","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	1
Details	Binding site: {"evidences":[{"source":"PubMed","id":"7643380","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"8950274","evidenceCode":"ECO:0000269"},{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"journal article","publicationDate":"1980","firstPage":"43","lastPage":"52","volume":"25","journal":"Sov. Phys. Crystallogr.","title":"X-ray structural investigation of leghemoglobin. VI. Structure of acetate-ferrileghemoglobin at a resolution of 2.0 A.","authors":["Arutiunian E.G.","Kuranova I.P.","Vainshtein B.K.","Steigemann W."]}},{"source":"PDB","id":"1GDI","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1LH1","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1LH2","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1LH3","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1LH5","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1LH6","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1LH7","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2GDM","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2LH1","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2LH2","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2LH3","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2LH5","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2LH6","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2LH7","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI5
Number of Residues	1
Details	Binding site: {"description":"proximal binding residue","evidences":[{"source":"PROSITE-ProRule","id":"PRU00238","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"7643380","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"8950274","evidenceCode":"ECO:0000269"},{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"journal article","publicationDate":"1980","firstPage":"43","lastPage":"52","volume":"25","journal":"Sov. Phys. Crystallogr.","title":"X-ray structural investigation of leghemoglobin. VI. Structure of acetate-ferrileghemoglobin at a resolution of 2.0 A.","authors":["Arutiunian E.G.","Kuranova I.P.","Vainshtein B.K.","Steigemann W."]}},{"source":"PDB","id":"1GDI","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1GDJ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1GDK","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1GDL","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1LH1","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1LH2","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1LH3","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1LH5","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1LH6","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1LH7","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2GDM","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2LH1","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2LH2","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2LH3","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2LH5","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2LH6","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2LH7","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI6
Number of Residues	1
Details	Binding site: {"evidences":[{"source":"Reference","evidenceCode":"ECO:0000269","citation":{"citationType":"journal article","publicationDate":"1980","firstPage":"43","lastPage":"52","volume":"25","journal":"Sov. Phys. Crystallogr.","title":"X-ray structural investigation of leghemoglobin. VI. Structure of acetate-ferrileghemoglobin at a resolution of 2.0 A.","authors":["Arutiunian E.G.","Kuranova I.P.","Vainshtein B.K.","Steigemann W."]}},{"source":"PDB","id":"1LH3","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1LH6","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1LH7","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2LH3","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2LH6","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2LH7","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI7
Number of Residues	1
Details	Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"Q3C1F7","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI8
Number of Residues	1
Details	Modified residue: {"description":"Nitrated tyrosine","evidences":[{"source":"UniProtKB","id":"P02234","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---