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1E4Y

Mutant P9L of adenylate kinase from E. coli, modified in the Gly-loop

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0000287molecular_functionmagnesium ion binding
A0004017molecular_functionadenylate kinase activity
A0004127molecular_functioncytidylate kinase activity
A0004550molecular_functionnucleoside diphosphate kinase activity
A0005515molecular_functionprotein binding
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006139biological_processnucleobase-containing compound metabolic process
A0006172biological_processADP biosynthetic process
A0006225biological_processUDP biosynthetic process
A0009123biological_processnucleoside monophosphate metabolic process
A0009132biological_processnucleoside diphosphate metabolic process
A0009165biological_processnucleotide biosynthetic process
A0015951biological_processpurine ribonucleotide interconversion
A0016208molecular_functionAMP binding
A0016301molecular_functionkinase activity
A0016310biological_processphosphorylation
A0016740molecular_functiontransferase activity
A0016776molecular_functionphosphotransferase activity, phosphate group as acceptor
A0019205molecular_functionnucleobase-containing compound kinase activity
A0033862molecular_functionUMP kinase activity
A0044209biological_processAMP salvage
A0046705biological_processCDP biosynthetic process
A0046940biological_processnucleoside monophosphate phosphorylation
A0050145molecular_functionnucleoside monophosphate kinase activity
A1901566biological_processorganonitrogen compound biosynthetic process
B0000166molecular_functionnucleotide binding
B0000287molecular_functionmagnesium ion binding
B0004017molecular_functionadenylate kinase activity
B0004127molecular_functioncytidylate kinase activity
B0004550molecular_functionnucleoside diphosphate kinase activity
B0005515molecular_functionprotein binding
B0005524molecular_functionATP binding
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0006139biological_processnucleobase-containing compound metabolic process
B0006172biological_processADP biosynthetic process
B0006225biological_processUDP biosynthetic process
B0009123biological_processnucleoside monophosphate metabolic process
B0009132biological_processnucleoside diphosphate metabolic process
B0009165biological_processnucleotide biosynthetic process
B0015951biological_processpurine ribonucleotide interconversion
B0016208molecular_functionAMP binding
B0016301molecular_functionkinase activity
B0016310biological_processphosphorylation
B0016740molecular_functiontransferase activity
B0016776molecular_functionphosphotransferase activity, phosphate group as acceptor
B0019205molecular_functionnucleobase-containing compound kinase activity
B0033862molecular_functionUMP kinase activity
B0044209biological_processAMP salvage
B0046705biological_processCDP biosynthetic process
B0046940biological_processnucleoside monophosphate phosphorylation
B0050145molecular_functionnucleoside monophosphate kinase activity
B1901566biological_processorganonitrogen compound biosynthetic process
Functional Information from PDB Data
site_idAC1
Number of Residues27
DetailsBINDING SITE FOR RESIDUE AP5 A 215
ChainResidue
AALA8
AGLY32
AARG36
ALYS57
ALEU58
AVAL59
AVAL64
AGLY85
AARG88
AGLN92
AARG119
ALEU9
AARG123
ATYR133
AHIS134
APHE137
AASN138
AARG156
AARG167
ALYS200
AVAL10
AALA11
AGLY12
ALYS13
AGLY14
ATHR15
ATHR31

site_idAC2
Number of Residues29
DetailsBINDING SITE FOR RESIDUE AP5 B 215
ChainResidue
BALA8
BLEU9
BVAL10
BALA11
BGLY12
BLYS13
BGLY14
BTHR15
BTHR31
BGLY32
BLEU35
BARG36
BMET53
BLYS57
BLEU58
BVAL59
BVAL64
BGLY85
BARG88
BGLN92
BARG119
BARG123
BVAL132
BTYR133
BHIS134
BPHE137
BARG156
BARG167
BLYS200

Functional Information from PROSITE/UniProt
site_idPS00113
Number of Residues12
DetailsADENYLATE_KINASE Adenylate kinase signature. FLLDGFPRtipQ
ChainResidueDetails
APHE81-GLN92

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues16
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00235, ECO:0000269|PubMed:1548697, ECO:0000269|PubMed:16302237, ECO:0000269|PubMed:19805185, ECO:0000269|PubMed:7937733, ECO:0000269|PubMed:8451239
ChainResidueDetails
AARG36
ALYS57
AGLN92
AARG123
AARG156
ALYS200
BVAL10
BTHR31
BARG36
BLYS57
BGLN92
BARG123
BARG156
BLYS200
AVAL10
ATHR31

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00235, ECO:0000269|PubMed:1548697, ECO:0000269|PubMed:19805185, ECO:0000269|PubMed:8451239
ChainResidueDetails
BGLY85
BARG167
AGLY85
AARG167

site_idSWS_FT_FI3
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:16302237
ChainResidueDetails
AARG119
BARG119

site_idSWS_FT_FI4
Number of Residues2
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_00235, ECO:0000269|PubMed:1548697, ECO:0000269|PubMed:16302237, ECO:0000269|PubMed:19805185, ECO:0000269|PubMed:8451239
ChainResidueDetails
AVAL132
BVAL132

site_idSWS_FT_FI5
Number of Residues2
DetailsMOD_RES: N6-acetyllysine => ECO:0000269|PubMed:18723842
ChainResidueDetails
ALYS192
BLYS192

218500

PDB entries from 2024-04-17

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