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1E1O

lysyl-tRNA Synthetase (LYSU) hexagonal form, complexed with lysine

Functional Information from GO Data
ChainGOidnamespacecontents
A0000049molecular_functiontRNA binding
A0000166molecular_functionnucleotide binding
A0000287molecular_functionmagnesium ion binding
A0003676molecular_functionnucleic acid binding
A0004812molecular_functionaminoacyl-tRNA ligase activity
A0004824molecular_functionlysine-tRNA ligase activity
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006412biological_processtranslation
A0006418biological_processtRNA aminoacylation for protein translation
A0006430biological_processlysyl-tRNA aminoacylation
A0016020cellular_componentmembrane
A0016874molecular_functionligase activity
A0034605biological_processcellular response to heat
A0036260biological_processRNA capping
A0042803molecular_functionprotein homodimerization activity
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues12
DetailsBINDING SITE FOR RESIDUE LYS A 510
ChainResidue
AGLY216
AGLY475
AHOH2205
AHOH2353
AGLU240
AARG262
AGLU278
ATYR280
AASN424
APHE426
AGLU428
AGLY473

site_idAC2
Number of Residues8
DetailsBINDING SITE FOR RESIDUE GOL A 520
ChainResidue
AARG194
AARG194
AGLU204
AGLU206
AILE257
AASN258
AASN258
AHOH2199

site_idAC3
Number of Residues7
DetailsBINDING SITE FOR RESIDUE GOL A 521
ChainResidue
ATYR286
ATHR390
AGLU391
AASN403
ATHR410
AASP411
AARG412

site_idAC4
Number of Residues1
DetailsBINDING SITE FOR RESIDUE GOL A 522
ChainResidue
AHIS382

site_idAC5
Number of Residues9
DetailsBINDING SITE FOR RESIDUE GOL A 523
ChainResidue
ASER218
AVAL396
AARG412
AASN424
APHE426
AMET454
AHOH2182
AHOH2354
AHOH2355

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE GOL A 524
ChainResidue
AHIS315
AGLN385
AHOH2356

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 525
ChainResidue
AHIS270
AASN271
APHE274
AILE491
AHOH2357

site_idAC8
Number of Residues12
DetailsBINDING SITE FOR RESIDUE GOL A 526
ChainResidue
APRO214
AGLY215
AALA217
ASER218
AALA219
APRO221
AILE237
AASP451
AGLU452
AALA453
AMET454
APHE455

site_idAC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE GOL A 527
ChainResidue
AVAL33
ALYS333
AASP404
AHOH2288
AHOH2360

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsBINDING:
ChainResidueDetails
AGLU414
AGLU421

site_idSWS_FT_FI2
Number of Residues2
DetailsMOD_RES: N6-acetyllysine => ECO:0000269|PubMed:18723842
ChainResidueDetails
ALYS113
ALYS155

Catalytic Information from CSA
site_idCSA1
Number of Residues3
DetailsAnnotated By Reference To The Literature 1asy
ChainResidueDetails
AARG480
AGLU278
AARG262

site_idCSA2
Number of Residues1
DetailsAnnotated By Reference To The Literature 1asy
ChainResidueDetails
AARG262

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PDB entries from 2025-06-25

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