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1DXR

Photosynthetic reaction center from Rhodopseudomonas viridis - His L168 Phe mutant (terbutryn complex)

Functional Information from GO Data
ChainGOidnamespacecontents
C0005506molecular_functioniron ion binding
C0009055molecular_functionelectron transfer activity
C0015979biological_processphotosynthesis
C0016020cellular_componentmembrane
C0019684biological_processphotosynthesis, light reaction
C0020037molecular_functionheme binding
C0030077cellular_componentplasma membrane light-harvesting complex
C0042717cellular_componentplasma membrane-derived chromatophore membrane
C0046872molecular_functionmetal ion binding
H0015979biological_processphotosynthesis
H0016020cellular_componentmembrane
H0019684biological_processphotosynthesis, light reaction
H0030077cellular_componentplasma membrane light-harvesting complex
H0042314molecular_functionbacteriochlorophyll binding
H0042717cellular_componentplasma membrane-derived chromatophore membrane
H0045156molecular_functionelectron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
L0009772biological_processphotosynthetic electron transport in photosystem II
L0015979biological_processphotosynthesis
L0016020cellular_componentmembrane
L0019684biological_processphotosynthesis, light reaction
L0030077cellular_componentplasma membrane light-harvesting complex
L0042314molecular_functionbacteriochlorophyll binding
L0042717cellular_componentplasma membrane-derived chromatophore membrane
L0045156molecular_functionelectron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
L0046872molecular_functionmetal ion binding
M0009772biological_processphotosynthetic electron transport in photosystem II
M0015979biological_processphotosynthesis
M0016020cellular_componentmembrane
M0019684biological_processphotosynthesis, light reaction
M0030077cellular_componentplasma membrane light-harvesting complex
M0042314molecular_functionbacteriochlorophyll binding
M0042717cellular_componentplasma membrane-derived chromatophore membrane
M0045156molecular_functionelectron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
M0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues20
DetailsBINDING SITE FOR RESIDUE HEC C 401
ChainResidue
CTYR56
CTHR78
CSER82
CCYS87
CCYS90
CHIS91
CLEU96
CALA97
CTYR104
CALA107
CARG108
CLYS57
CVAL212
CASN58
CVAL59
CLYS60
CVAL61
CLEU62
CPHE70
CMET74

site_idAC2
Number of Residues16
DetailsBINDING SITE FOR RESIDUE HEC C 402
ChainResidue
CTYR89
CTYR102
CVAL106
CMET110
CLEU111
CMET113
CTHR114
CCYS132
CCYS135
CHIS136
CPRO140
CLEU141
CPRO142
CLEU289
CARG293
CPRO301

site_idAC3
Number of Residues22
DetailsBINDING SITE FOR RESIDUE HEC C 403
ChainResidue
CVAL201
CARG202
CVAL203
CVAL204
CMET233
CSER237
CASN243
CCYS244
CCYS247
CHIS248
CPHE253
CGLU254
CARG264
CALA267
CTRP268
CARG272
CHOH2148
CHOH2214
CHOH2215
CHOH2216
LTYR162
MILE189

site_idAC4
Number of Residues24
DetailsBINDING SITE FOR RESIDUE HEC C 404
ChainResidue
CHIS124
CVAL125
CTHR128
CGLY129
CLEU240
CPHE246
CGLN263
CILE266
CILE271
CMET273
CVAL274
CASP304
CCYS305
CCYS308
CHIS309
CTHR313
CLYS314
CPRO315
CHOH2217
CHOH2218
CHOH2219
CHOH2220
CHOH2221
CHOH2222

site_idAC5
Number of Residues2
DetailsBINDING SITE FOR RESIDUE LDA H 1259
ChainResidue
HARG33
HASP56

site_idAC6
Number of Residues5
DetailsBINDING SITE FOR RESIDUE LDA H 1260
ChainResidue
HVAL59
HTYR60
HLEU62
HPRO65
HPRO79

site_idAC7
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 H 1261
ChainResidue
HARG33
HARG37
HTYR41
HLEU43
HHOH2015
HHOH2034
HHOH3004
MARG251

site_idAC8
Number of Residues17
DetailsBINDING SITE FOR RESIDUE BCB L 400
ChainResidue
LVAL157
LPHE160
LTRP167
LPHE168
LHIS173
LSER176
LLEU180
LILE240
LPHE241
LGLY244
LTHR248
LBCB401
MTYR195
MTYR208
MBCB401
LMET127
LPHE128

site_idAC9
Number of Residues17
DetailsBINDING SITE FOR RESIDUE BCB L 401
ChainResidue
LPHE128
LPHE146
LILE150
LHIS153
LLEU154
LVAL157
LBCB400
LBPB402
MTYR195
MGLY201
MILE204
MGLY205
MTYR208
MGLY209
MBCB401
MLDA1325
MHOH2077

site_idBC1
Number of Residues15
DetailsBINDING SITE FOR RESIDUE BPB L 402
ChainResidue
LPHE97
LTRP100
LGLU104
LVAL117
LPHE121
LPRO124
LTYR148
LHIS153
LALA237
LPHE241
LBCB401
LMQ9501
MTYR208
MLEU212
MTRP250

site_idBC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE FE2 L 500
ChainResidue
LHIS190
LHIS230
MHIS217
MGLU232
MHIS264

site_idBC3
Number of Residues12
DetailsBINDING SITE FOR RESIDUE MQ9 L 501
ChainResidue
LTYR29
LPHE43
LTRP100
LBPB402
MHIS217
MTHR220
MALA246
MTRP250
MPHE256
MALA258
MTHR259
MVAL263

site_idBC4
Number of Residues11
DetailsBINDING SITE FOR RESIDUE MST L 502
ChainResidue
LLEU189
LHIS190
LGLU212
LASN213
LPHE216
LTYR222
LSER223
LILE224
LGLY225
LILE229
LHOH2059

site_idBC5
Number of Residues4
DetailsBINDING SITE FOR RESIDUE LDA L 1274
ChainResidue
LASP60
LPHE62
MTYR195
MALA301

site_idBC6
Number of Residues20
DetailsBINDING SITE FOR RESIDUE BCB M 400
ChainResidue
LPHE168
LMET174
LVAL177
LSER178
LPHE181
LVAL182
LMET185
LVAL220
LHOH2057
MMET120
MVAL155
MILE158
MILE177
MTRP178
MHIS180
MILE181
MLEU184
MBCB401
MBPB402
MNS5600

site_idBC7
Number of Residues24
DetailsBINDING SITE FOR RESIDUE BCB M 401
ChainResidue
LVAL157
LTYR162
LPHE181
LBCB400
LBCB401
MGLY62
MILE69
MMET120
MPHE148
MPHE154
MVAL155
MLEU184
MSER188
MPHE194
MTYR195
MHIS200
MSER203
MILE204
MTYR208
MMET275
MALA278
MILE282
MBCB400
MBPB402

site_idBC8
Number of Residues17
DetailsBINDING SITE FOR RESIDUE BPB M 402
ChainResidue
LPHE181
LMET185
LLEU189
LVAL220
MALA58
MPHE59
MILE66
MSER123
MLEU124
MTRP127
MVAL131
MILE144
MASN147
MPHE148
MSER271
MBCB400
MBCB401

site_idBC9
Number of Residues7
DetailsBINDING SITE FOR RESIDUE NS5 M 600
ChainResidue
MGLY117
MTHR121
MGLY159
MCYS160
MVAL173
MGLY176
MBCB400

site_idCC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE LDA M 1324
ChainResidue
MTRP23
MSER133
MSO41329

site_idCC2
Number of Residues1
DetailsBINDING SITE FOR RESIDUE LDA M 1325
ChainResidue
LBCB401

site_idCC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE LDA M 1326
ChainResidue
MPHE71
MASN72
MTRP112

site_idCC4
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 M 1327
ChainResidue
HHOH2014
LASN199
LHOH2062
MHIS143
MARG265
MHOH3005

site_idCC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE SO4 M 1328
ChainResidue
HLEU246
HHOH3008
LHOH3006
MALA1
MARG226
MHOH3007

site_idCC6
Number of Residues8
DetailsBINDING SITE FOR RESIDUE SO4 M 1329
ChainResidue
MTRP23
MTYR50
MALA53
MSER54
MSER133
MLDA1324
MHOH2059
MHOH3009

Functional Information from PROSITE/UniProt
site_idPS00244
Number of Residues27
DetailsREACTION_CENTER Photosynthetic reaction center proteins signature. NwfynPgHmsSvsflfvnamalGlHGG
ChainResidueDetails
LASN166-GLY192
MASN193-ALA219

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues10
DetailsTOPO_DOM: Periplasmic => ECO:0000269|PubMed:2676514
ChainResidueDetails
HFME1-ASP11
MLEU138-THR142
MVAL224-THR259
CHIS124
CHIS136
CMET233
CHIS248
CHIS309

site_idSWS_FT_FI2
Number of Residues18
DetailsTRANSMEM: Helical
ChainResidueDetails
HILE12-LEU30
MGLY111-ALA137
MHIS143-VAL166
MPRO198-ALA223
MILE260-LEU284
CCYS247
CCYS305
CCYS308

site_idSWS_FT_FI3
Number of Residues227
DetailsTOPO_DOM: Cytoplasmic => ECO:0000269|PubMed:2676514
ChainResidueDetails
HTYR31-LEU258
MGLY167-CYS197

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: N-formylmethionine => ECO:0000269|PubMed:16453623
ChainResidueDetails
HFME1
MGLY201

site_idSWS_FT_FI5
Number of Residues4
DetailsBINDING:
ChainResidueDetails
MGLY218
MILE233
MARG251
MARG265

225158

PDB entries from 2024-09-18

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