1DWJ
study on radiation damage on a cryocooled crystal. Refined part 6: structure after a radiation dose of 54*10e15 photons/mm2
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| M | 0004553 | molecular_function | hydrolase activity, hydrolyzing O-glycosyl compounds |
| M | 0005773 | cellular_component | vacuole |
| M | 0005975 | biological_process | carbohydrate metabolic process |
| M | 0008422 | molecular_function | beta-glucosidase activity |
| M | 0016787 | molecular_function | hydrolase activity |
| M | 0016798 | molecular_function | hydrolase activity, acting on glycosyl bonds |
| M | 0019137 | molecular_function | thioglucosidase activity |
| M | 0046872 | molecular_function | metal ion binding |
Functional Information from PROSITE/UniProt
| site_id | PS00572 |
| Number of Residues | 9 |
| Details | GLYCOSYL_HYDROL_F1_1 Glycosyl hydrolases family 1 active site. IYVTENGIS |
| Chain | Residue | Details |
| M | ILE405-SER413 |
| site_id | PS00653 |
| Number of Residues | 15 |
| Details | GLYCOSYL_HYDROL_F1_2 Glycosyl hydrolases family 1 N-terminal signature. FiFGvAsSAYQiEgT |
| Chain | Residue | Details |
| M | PHE29-THR43 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 1 |
| Details | Active site: {"description":"Nucleophile"} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 5 |
| Details | Binding site: {} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 2 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"10978344","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 3 |
| Details | Binding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 11 |
| Details | Glycosylation: {"description":"N-linked (GlcNAc...) asparagine","evidences":[{"source":"PubMed","id":"10978344","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"15889170","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"9195886","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
Catalytic Information from CSA
| site_id | CSA1 |
| Number of Residues | 3 |
| Details | Annotated By Reference To The Literature 1cbg |
| Chain | Residue | Details |
| M | GLN187 | |
| M | ASN328 | |
| M | GLU409 |
| site_id | CSA2 |
| Number of Residues | 2 |
| Details | Annotated By Reference To The Literature 1cbg |
| Chain | Residue | Details |
| M | GLN187 | |
| M | GLU409 |
| site_id | CSA3 |
| Number of Residues | 6 |
| Details | Annotated By Reference To The Literature 1cbg |
| Chain | Residue | Details |
| M | GLN187 | |
| M | ASN328 | |
| M | ARG95 | |
| M | GLU409 | |
| M | TYR330 | |
| M | SER190 |
| site_id | MCSA1 |
| Number of Residues | 6 |
| Details | M-CSA 460 |
| Chain | Residue | Details |
