Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1DPO

STRUCTURE OF RAT TRYPSIN

Functional Information from GO Data
ChainGOidnamespacecontents
A0004252molecular_functionserine-type endopeptidase activity
A0005509molecular_functioncalcium ion binding
A0005515molecular_functionprotein binding
A0005576cellular_componentextracellular region
A0005615cellular_componentextracellular space
A0006508biological_processproteolysis
A0007584biological_processresponse to nutrient
A0007586biological_processdigestion
A0008236molecular_functionserine-type peptidase activity
A0030574biological_processcollagen catabolic process
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE CA A 246
ChainResidue
AGLU70
AASN72
AVAL75
AGLU80
AHOH347
AHOH353

site_idAC2
Number of Residues3
DetailsBINDING SITE FOR RESIDUE SO4 A 250
ChainResidue
AASN100
AASN101
AASN179

site_idAC3
Number of Residues5
DetailsBINDING SITE FOR RESIDUE SO4 A 251
ChainResidue
AALA132
APRO164
AGLN165
AHOH358
AHOH359

site_idAC4
Number of Residues9
DetailsBINDING SITE FOR RESIDUE BEN A 247
ChainResidue
AASP189
ASER190
ACYS191
AGLN192
ATRP215
AGLY216
AGLY219
AGLY226
AHOH325

site_idAC5
Number of Residues8
DetailsBINDING SITE FOR RESIDUE BEN A 248
ChainResidue
ASER146
AGLY188
AALA221
AALA221
ALEU221
APRO222
AHOH400
AHOH401

site_idAC6
Number of Residues3
DetailsBINDING SITE FOR RESIDUE BEN A 249
ChainResidue
AARG62
AILE63
AGLN64

site_idCAT
Number of Residues3
DetailsCATALYTIC TRIAD.
ChainResidue
AHIS57
AASP102
ACYS195

Functional Information from PROSITE/UniProt
site_idPS00134
Number of Residues6
DetailsTRYPSIN_HIS Serine proteases, trypsin family, histidine active site. VSAAHC
ChainResidueDetails
AVAL53-CYS58

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsACT_SITE: Charge relay system
ChainResidueDetails
AHIS57
AASP102
ACYS195

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING:
ChainResidueDetails
AGLU70
AASN72
AVAL75
AGLU80

site_idSWS_FT_FI3
Number of Residues1
DetailsSITE: Required for specificity => ECO:0000250
ChainResidueDetails
AASP189

Catalytic Information from CSA
site_idCSA1
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
ACYS195
AGLY196

site_idCSA2
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
ACYS195
AGLY193

site_idCSA3
Number of Residues3
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
AASP102
ACYS195
AHIS57

site_idCSA4
Number of Residues4
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
AASP102
ACYS195
AGLY193
AHIS57

site_idCSA5
Number of Residues2
DetailsAnnotated By Reference To The Literature 1a0j
ChainResidueDetails
AASP102
AHIS57

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon