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1DIQ

CRYSTAL STRUCTURE OF P-CRESOL METHYLHYDROXYLASE WITH SUBSTRATE BOUND

Functional Information from GO Data
ChainGOidnamespacecontents
A0003824molecular_functioncatalytic activity
A0004458molecular_functionD-lactate dehydrogenase (cytochrome) activity
A0008720molecular_functionD-lactate dehydrogenase activity
A0016491molecular_functionoxidoreductase activity
A0018695molecular_function4-cresol dehydrogenase (hydroxylating) activity
A0050660molecular_functionflavin adenine dinucleotide binding
A0071949molecular_functionFAD binding
A1903457biological_processlactate catabolic process
B0003824molecular_functioncatalytic activity
B0004458molecular_functionD-lactate dehydrogenase (cytochrome) activity
B0008720molecular_functionD-lactate dehydrogenase activity
B0016491molecular_functionoxidoreductase activity
B0018695molecular_function4-cresol dehydrogenase (hydroxylating) activity
B0050660molecular_functionflavin adenine dinucleotide binding
B0071949molecular_functionFAD binding
B1903457biological_processlactate catabolic process
C0009055molecular_functionelectron transfer activity
C0020037molecular_functionheme binding
C0046872molecular_functionmetal ion binding
D0009055molecular_functionelectron transfer activity
D0020037molecular_functionheme binding
D0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL B 701
ChainResidue
BMET48
BGLY94
BGLY96
BSER97

site_idAC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE CL A 702
ChainResidue
AMET48
AGLY94
AGLY96
ASER97

site_idAC3
Number of Residues29
DetailsBINDING SITE FOR RESIDUE FAD A 599
ChainResidue
ATHR86
ASER88
ATHR89
AGLY90
AARG91
AASN92
APHE93
ASER153
AALA154
APRO155
AALA159
AGLY160
AGLY163
AASN164
AMET166
AGLY169
AVAL170
ATYR172
AGLY229
AILE230
ACYS231
AGLU380
ATYR384
ATRP394
AARG474
AARG512
APCR798
AHOH823
ATRP85

site_idAC4
Number of Residues10
DetailsBINDING SITE FOR RESIDUE PCR A 798
ChainResidue
ATYR95
ATYR172
ATRP285
AGLU380
ATRP394
AGLU427
AILE429
AVAL438
ATYR473
AFAD599

site_idAC5
Number of Residues19
DetailsBINDING SITE FOR RESIDUE HEC C 699
ChainResidue
ALEU378
APHE381
AHOH879
BLYS419
CHOH275
CVAL614
CCYS615
CCYS618
CHIS619
CVAL625
CPRO627
CLEU629
CARG632
CTYR638
CILE642
CVAL643
CPHE647
CARG648
CMET650

site_idAC6
Number of Residues29
DetailsBINDING SITE FOR RESIDUE FAD B 599
ChainResidue
BTRP85
BTHR86
BSER88
BTHR89
BGLY90
BARG91
BASN92
BPHE93
BSER153
BALA154
BPRO155
BALA159
BGLY160
BGLY163
BASN164
BMET166
BGLY169
BVAL170
BTYR172
BGLY229
BCYS231
BGLU380
BTYR384
BTRP394
BARG474
BARG512
BPCR799
BHOH905
BHOH923

site_idAC7
Number of Residues11
DetailsBINDING SITE FOR RESIDUE PCR B 799
ChainResidue
BTRP394
BGLU427
BILE429
BVAL438
BTYR473
BFAD599
BHOH821
BTYR95
BTYR172
BTRP285
BGLU380

site_idAC8
Number of Residues17
DetailsBINDING SITE FOR RESIDUE HEC D 699
ChainResidue
ALYS419
BPHE381
DHOH84
DVAL614
DCYS615
DCYS618
DHIS619
DVAL625
DPRO627
DLEU629
DARG632
DTYR638
DILE642
DVAL643
DPHE647
DARG648
DMET650

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: covalent
ChainResidueDetails
CCYS615
CCYS618
DCYS615
DCYS618

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: axial binding residue
ChainResidueDetails
CHIS619
CMET650
DHIS619
DMET650

Catalytic Information from CSA
site_idCSA1
Number of Residues6
DetailsAnnotated By Reference To The Literature 1dii
ChainResidueDetails
ATYR473
ATYR95
AARG474
AGLU380
AGLU427
AHIS436

site_idCSA2
Number of Residues6
DetailsAnnotated By Reference To The Literature 1dii
ChainResidueDetails
BTYR473
BTYR95
BARG474
BGLU380
BGLU427
BHIS436

site_idMCSA1
Number of Residues2
DetailsM-CSA 141
ChainResidueDetails
CALA649polar interaction, polar/non-polar interaction, single electron acceptor, single electron donor, single electron relay
AARG512activator, hydrogen bond donor
CMET650metal ligand, polar interaction, single electron acceptor, single electron donor, single electron relay
AGLU286hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay
ATYR367hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay
AGLU380hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
ATYR384covalently attached, polar/non-polar interaction, single electron acceptor, single electron donor, single electron relay
AHIS436hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay
ATYR473hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay
AARG474electrostatic stabiliser, hydrogen bond donor

site_idMCSA2
Number of Residues2
DetailsM-CSA 141
ChainResidueDetails
DALA649polar interaction, polar/non-polar interaction, single electron acceptor, single electron donor, single electron relay
BARG512activator, hydrogen bond donor
DMET650metal ligand, polar interaction, single electron acceptor, single electron donor, single electron relay
BGLU286hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay
BTYR367hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay
BGLU380hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
BTYR384covalently attached, polar/non-polar interaction, single electron acceptor, single electron donor, single electron relay
BHIS436hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay
BTYR473hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay
BARG474electrostatic stabiliser, hydrogen bond donor

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PDB entries from 2024-07-17

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