Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1D3Y

STRUCTURE OF THE DNA TOPOISOMERASE VI A SUBUNIT

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003824molecular_functioncatalytic activity
A0003918molecular_functionDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
A0005524molecular_functionATP binding
A0005694cellular_componentchromosome
A0006259biological_processDNA metabolic process
A0006265biological_processDNA topological change
B0003677molecular_functionDNA binding
B0003824molecular_functioncatalytic activity
B0003918molecular_functionDNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
B0005524molecular_functionATP binding
B0005694cellular_componentchromosome
B0006259biological_processDNA metabolic process
B0006265biological_processDNA topological change
Functional Information from PDB Data
site_idAC1
Number of Residues3
DetailsBINDING SITE FOR RESIDUE NA A 370
ChainResidue
ALYS74
AGLN78
AASP114

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 371
ChainResidue
AGLU197
AASP249
AHOH381
AHOH399
AHOH463
AHOH511

site_idAC3
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG A 372
ChainResidue
AHOH394
AHOH426
AHOH490
BHOH376
BHOH379
BHOH451

site_idAC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE NA B 373
ChainResidue
BLYS74
BGLN78
BASP114

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE MG B 374
ChainResidue
BGLU197
BASP249
BHOH413
BHOH417
BHOH426
BHOH501

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsACT_SITE: O-(5'-phospho-DNA)-tyrosine intermediate => ECO:0000255|PROSITE-ProRule:PRU01385
ChainResidueDetails
ATYR103
BTYR103

site_idSWS_FT_FI2
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:10545127
ChainResidueDetails
AGLU197
AASP249
BGLU197
BASP249

224201

PDB entries from 2024-08-28

PDB statisticsPDBj update infoContact PDBjnumon