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1CBF

THE X-RAY STRUCTURE OF A COBALAMIN BIOSYNTHETIC ENZYME, COBALT PRECORRIN-4 METHYLTRANSFERASE, CBIF

Functional Information from GO Data
ChainGOidnamespacecontents
A0008168molecular_functionmethyltransferase activity
A0009236biological_processcobalamin biosynthetic process
A0016740molecular_functiontransferase activity
A0032259biological_processmethylation
A0046026molecular_functionprecorrin-4 C11-methyltransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues11
DetailsBINDING SITE FOR RESIDUE PO4 A 400
ChainResidue
APRO16
AARG17
AGLY18
ASER19
AHIS20
AGLY160
AARG161
ATHR162
AHOH574
AHOH576
AHOH577

site_idAC2
Number of Residues5
DetailsBINDING SITE FOR RESIDUE PO4 A 401
ChainResidue
AHIS100
ATHR101
AGLY108
AHOH504
AHOH613

site_idAC3
Number of Residues18
DetailsBINDING SITE FOR RESIDUE SAH A 300
ChainResidue
APRO30
ATHR101
AGLY102
AASP103
AMET106
ATHR131
ASER132
APHE183
ALEU184
AVAL210
ALYS212
AALA213
AGLN240
AALA241
AMET242
AHOH504
AHOH509
AHOH519

site_idP-4
Number of Residues7
DetailsPRECORRIN-4 BINDING SITE IN DEEP TROUGH. ALSO, LOCATION OF BOUND PHOSPHATE RESIDUE 401. PHOSPHATE PRESENT FROM CRYSTALLIZATION CONDITIONS.
ChainResidue
APO4401
AALA53
ASER55
ALEU79
AARG98
AGLU112
AGLN113

site_idPAL
Number of Residues1
DetailsPHOSPHATE ION INVOLVED IN CRYSTAL CONTACT.
ChainResidue
APO4400

site_idSAH
Number of Residues1
DetailsS-ADENOSYL-HOMOCYSTEINE BINDING SITE. CRYSTALS FORMED IN THE PRESENCE OF ADOMET OR ADOHCY.
ChainResidue
ASAH300

Functional Information from PROSITE/UniProt
site_idPS00839
Number of Residues15
DetailsSUMT_1 Uroporphyrin-III C-methyltransferase signature 1. IGAGPGdpdLITVKG
ChainResidueDetails
AILE26-GLY40

237735

PDB entries from 2025-06-18

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