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1AWT

SECYPA COMPLEXED WITH HAGPIA

Functional Information from GO Data
ChainGOidnamespacecontents
A0000413biological_processprotein peptidyl-prolyl isomerization
A0001933biological_processnegative regulation of protein phosphorylation
A0001934biological_processpositive regulation of protein phosphorylation
A0003723molecular_functionRNA binding
A0003755molecular_functionpeptidyl-prolyl cis-trans isomerase activity
A0005178molecular_functionintegrin binding
A0005515molecular_functionprotein binding
A0005576cellular_componentextracellular region
A0005615cellular_componentextracellular space
A0005634cellular_componentnucleus
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0005925cellular_componentfocal adhesion
A0006357biological_processregulation of transcription by RNA polymerase II
A0006457biological_processprotein folding
A0006469biological_processnegative regulation of protein kinase activity
A0006915biological_processapoptotic process
A0016018molecular_functioncyclosporin A binding
A0016020cellular_componentmembrane
A0019076biological_processviral release from host cell
A0030168biological_processplatelet activation
A0030182biological_processneuron differentiation
A0030593biological_processneutrophil chemotaxis
A0030595biological_processleukocyte chemotaxis
A0031982cellular_componentvesicle
A0032148biological_processactivation of protein kinase B activity
A0032873biological_processnegative regulation of stress-activated MAPK cascade
A0032991cellular_componentprotein-containing complex
A0034389biological_processlipid droplet organization
A0034599biological_processcellular response to oxidative stress
A0034774cellular_componentsecretory granule lumen
A0042118biological_processendothelial cell activation
A0043410biological_processpositive regulation of MAPK cascade
A0045069biological_processregulation of viral genome replication
A0045070biological_processpositive regulation of viral genome replication
A0046790molecular_functionvirion binding
A0050714biological_processpositive regulation of protein secretion
A0051082molecular_functionunfolded protein binding
A0051092biological_processpositive regulation of NF-kappaB transcription factor activity
A0060352biological_processcell adhesion molecule production
A0061944biological_processnegative regulation of protein K48-linked ubiquitination
A0070062cellular_componentextracellular exosome
A0070527biological_processplatelet aggregation
A0140839molecular_functionRNA polymerase II CTD heptapeptide repeat P3 isomerase activity
A0140840molecular_functionRNA polymerase II CTD heptapeptide repeat P6 isomerase activity
A1902176biological_processnegative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
A1903901biological_processnegative regulation of viral life cycle
A1904399molecular_functionheparan sulfate binding
A1904813cellular_componentficolin-1-rich granule lumen
A2001233biological_processregulation of apoptotic signaling pathway
B0000413biological_processprotein peptidyl-prolyl isomerization
B0001933biological_processnegative regulation of protein phosphorylation
B0001934biological_processpositive regulation of protein phosphorylation
B0003723molecular_functionRNA binding
B0003755molecular_functionpeptidyl-prolyl cis-trans isomerase activity
B0005178molecular_functionintegrin binding
B0005515molecular_functionprotein binding
B0005576cellular_componentextracellular region
B0005615cellular_componentextracellular space
B0005634cellular_componentnucleus
B0005737cellular_componentcytoplasm
B0005829cellular_componentcytosol
B0005925cellular_componentfocal adhesion
B0006357biological_processregulation of transcription by RNA polymerase II
B0006457biological_processprotein folding
B0006469biological_processnegative regulation of protein kinase activity
B0006915biological_processapoptotic process
B0016018molecular_functioncyclosporin A binding
B0016020cellular_componentmembrane
B0019076biological_processviral release from host cell
B0030168biological_processplatelet activation
B0030182biological_processneuron differentiation
B0030593biological_processneutrophil chemotaxis
B0030595biological_processleukocyte chemotaxis
B0031982cellular_componentvesicle
B0032148biological_processactivation of protein kinase B activity
B0032873biological_processnegative regulation of stress-activated MAPK cascade
B0032991cellular_componentprotein-containing complex
B0034389biological_processlipid droplet organization
B0034599biological_processcellular response to oxidative stress
B0034774cellular_componentsecretory granule lumen
B0042118biological_processendothelial cell activation
B0043410biological_processpositive regulation of MAPK cascade
B0045069biological_processregulation of viral genome replication
B0045070biological_processpositive regulation of viral genome replication
B0046790molecular_functionvirion binding
B0050714biological_processpositive regulation of protein secretion
B0051082molecular_functionunfolded protein binding
B0051092biological_processpositive regulation of NF-kappaB transcription factor activity
B0060352biological_processcell adhesion molecule production
B0061944biological_processnegative regulation of protein K48-linked ubiquitination
B0070062cellular_componentextracellular exosome
B0070527biological_processplatelet aggregation
B0140839molecular_functionRNA polymerase II CTD heptapeptide repeat P3 isomerase activity
B0140840molecular_functionRNA polymerase II CTD heptapeptide repeat P6 isomerase activity
B1902176biological_processnegative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
B1903901biological_processnegative regulation of viral life cycle
B1904399molecular_functionheparan sulfate binding
B1904813cellular_componentficolin-1-rich granule lumen
B2001233biological_processregulation of apoptotic signaling pathway
C0000413biological_processprotein peptidyl-prolyl isomerization
C0001933biological_processnegative regulation of protein phosphorylation
C0001934biological_processpositive regulation of protein phosphorylation
C0003723molecular_functionRNA binding
C0003755molecular_functionpeptidyl-prolyl cis-trans isomerase activity
C0005178molecular_functionintegrin binding
C0005515molecular_functionprotein binding
C0005576cellular_componentextracellular region
C0005615cellular_componentextracellular space
C0005634cellular_componentnucleus
C0005737cellular_componentcytoplasm
C0005829cellular_componentcytosol
C0005925cellular_componentfocal adhesion
C0006357biological_processregulation of transcription by RNA polymerase II
C0006457biological_processprotein folding
C0006469biological_processnegative regulation of protein kinase activity
C0006915biological_processapoptotic process
C0016018molecular_functioncyclosporin A binding
C0016020cellular_componentmembrane
C0019076biological_processviral release from host cell
C0030168biological_processplatelet activation
C0030182biological_processneuron differentiation
C0030593biological_processneutrophil chemotaxis
C0030595biological_processleukocyte chemotaxis
C0031982cellular_componentvesicle
C0032148biological_processactivation of protein kinase B activity
C0032873biological_processnegative regulation of stress-activated MAPK cascade
C0032991cellular_componentprotein-containing complex
C0034389biological_processlipid droplet organization
C0034599biological_processcellular response to oxidative stress
C0034774cellular_componentsecretory granule lumen
C0042118biological_processendothelial cell activation
C0043410biological_processpositive regulation of MAPK cascade
C0045069biological_processregulation of viral genome replication
C0045070biological_processpositive regulation of viral genome replication
C0046790molecular_functionvirion binding
C0050714biological_processpositive regulation of protein secretion
C0051082molecular_functionunfolded protein binding
C0051092biological_processpositive regulation of NF-kappaB transcription factor activity
C0060352biological_processcell adhesion molecule production
C0061944biological_processnegative regulation of protein K48-linked ubiquitination
C0070062cellular_componentextracellular exosome
C0070527biological_processplatelet aggregation
C0140839molecular_functionRNA polymerase II CTD heptapeptide repeat P3 isomerase activity
C0140840molecular_functionRNA polymerase II CTD heptapeptide repeat P6 isomerase activity
C1902176biological_processnegative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
C1903901biological_processnegative regulation of viral life cycle
C1904399molecular_functionheparan sulfate binding
C1904813cellular_componentficolin-1-rich granule lumen
C2001233biological_processregulation of apoptotic signaling pathway
D0000413biological_processprotein peptidyl-prolyl isomerization
D0001933biological_processnegative regulation of protein phosphorylation
D0001934biological_processpositive regulation of protein phosphorylation
D0003723molecular_functionRNA binding
D0003755molecular_functionpeptidyl-prolyl cis-trans isomerase activity
D0005178molecular_functionintegrin binding
D0005515molecular_functionprotein binding
D0005576cellular_componentextracellular region
D0005615cellular_componentextracellular space
D0005634cellular_componentnucleus
D0005737cellular_componentcytoplasm
D0005829cellular_componentcytosol
D0005925cellular_componentfocal adhesion
D0006357biological_processregulation of transcription by RNA polymerase II
D0006457biological_processprotein folding
D0006469biological_processnegative regulation of protein kinase activity
D0006915biological_processapoptotic process
D0016018molecular_functioncyclosporin A binding
D0016020cellular_componentmembrane
D0019076biological_processviral release from host cell
D0030168biological_processplatelet activation
D0030182biological_processneuron differentiation
D0030593biological_processneutrophil chemotaxis
D0030595biological_processleukocyte chemotaxis
D0031982cellular_componentvesicle
D0032148biological_processactivation of protein kinase B activity
D0032873biological_processnegative regulation of stress-activated MAPK cascade
D0032991cellular_componentprotein-containing complex
D0034389biological_processlipid droplet organization
D0034599biological_processcellular response to oxidative stress
D0034774cellular_componentsecretory granule lumen
D0042118biological_processendothelial cell activation
D0043410biological_processpositive regulation of MAPK cascade
D0045069biological_processregulation of viral genome replication
D0045070biological_processpositive regulation of viral genome replication
D0046790molecular_functionvirion binding
D0050714biological_processpositive regulation of protein secretion
D0051082molecular_functionunfolded protein binding
D0051092biological_processpositive regulation of NF-kappaB transcription factor activity
D0060352biological_processcell adhesion molecule production
D0061944biological_processnegative regulation of protein K48-linked ubiquitination
D0070062cellular_componentextracellular exosome
D0070527biological_processplatelet aggregation
D0140839molecular_functionRNA polymerase II CTD heptapeptide repeat P3 isomerase activity
D0140840molecular_functionRNA polymerase II CTD heptapeptide repeat P6 isomerase activity
D1902176biological_processnegative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
D1903901biological_processnegative regulation of viral life cycle
D1904399molecular_functionheparan sulfate binding
D1904813cellular_componentficolin-1-rich granule lumen
D2001233biological_processregulation of apoptotic signaling pathway
E0000413biological_processprotein peptidyl-prolyl isomerization
E0001933biological_processnegative regulation of protein phosphorylation
E0001934biological_processpositive regulation of protein phosphorylation
E0003723molecular_functionRNA binding
E0003755molecular_functionpeptidyl-prolyl cis-trans isomerase activity
E0005178molecular_functionintegrin binding
E0005515molecular_functionprotein binding
E0005576cellular_componentextracellular region
E0005615cellular_componentextracellular space
E0005634cellular_componentnucleus
E0005737cellular_componentcytoplasm
E0005829cellular_componentcytosol
E0005925cellular_componentfocal adhesion
E0006357biological_processregulation of transcription by RNA polymerase II
E0006457biological_processprotein folding
E0006469biological_processnegative regulation of protein kinase activity
E0006915biological_processapoptotic process
E0016018molecular_functioncyclosporin A binding
E0016020cellular_componentmembrane
E0019076biological_processviral release from host cell
E0030168biological_processplatelet activation
E0030182biological_processneuron differentiation
E0030593biological_processneutrophil chemotaxis
E0030595biological_processleukocyte chemotaxis
E0031982cellular_componentvesicle
E0032148biological_processactivation of protein kinase B activity
E0032873biological_processnegative regulation of stress-activated MAPK cascade
E0032991cellular_componentprotein-containing complex
E0034389biological_processlipid droplet organization
E0034599biological_processcellular response to oxidative stress
E0034774cellular_componentsecretory granule lumen
E0042118biological_processendothelial cell activation
E0043410biological_processpositive regulation of MAPK cascade
E0045069biological_processregulation of viral genome replication
E0045070biological_processpositive regulation of viral genome replication
E0046790molecular_functionvirion binding
E0050714biological_processpositive regulation of protein secretion
E0051082molecular_functionunfolded protein binding
E0051092biological_processpositive regulation of NF-kappaB transcription factor activity
E0060352biological_processcell adhesion molecule production
E0061944biological_processnegative regulation of protein K48-linked ubiquitination
E0070062cellular_componentextracellular exosome
E0070527biological_processplatelet aggregation
E0140839molecular_functionRNA polymerase II CTD heptapeptide repeat P3 isomerase activity
E0140840molecular_functionRNA polymerase II CTD heptapeptide repeat P6 isomerase activity
E1902176biological_processnegative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
E1903901biological_processnegative regulation of viral life cycle
E1904399molecular_functionheparan sulfate binding
E1904813cellular_componentficolin-1-rich granule lumen
E2001233biological_processregulation of apoptotic signaling pathway
F0000413biological_processprotein peptidyl-prolyl isomerization
F0001933biological_processnegative regulation of protein phosphorylation
F0001934biological_processpositive regulation of protein phosphorylation
F0003723molecular_functionRNA binding
F0003755molecular_functionpeptidyl-prolyl cis-trans isomerase activity
F0005178molecular_functionintegrin binding
F0005515molecular_functionprotein binding
F0005576cellular_componentextracellular region
F0005615cellular_componentextracellular space
F0005634cellular_componentnucleus
F0005737cellular_componentcytoplasm
F0005829cellular_componentcytosol
F0005925cellular_componentfocal adhesion
F0006357biological_processregulation of transcription by RNA polymerase II
F0006457biological_processprotein folding
F0006469biological_processnegative regulation of protein kinase activity
F0006915biological_processapoptotic process
F0016018molecular_functioncyclosporin A binding
F0016020cellular_componentmembrane
F0019076biological_processviral release from host cell
F0030168biological_processplatelet activation
F0030182biological_processneuron differentiation
F0030593biological_processneutrophil chemotaxis
F0030595biological_processleukocyte chemotaxis
F0031982cellular_componentvesicle
F0032148biological_processactivation of protein kinase B activity
F0032873biological_processnegative regulation of stress-activated MAPK cascade
F0032991cellular_componentprotein-containing complex
F0034389biological_processlipid droplet organization
F0034599biological_processcellular response to oxidative stress
F0034774cellular_componentsecretory granule lumen
F0042118biological_processendothelial cell activation
F0043410biological_processpositive regulation of MAPK cascade
F0045069biological_processregulation of viral genome replication
F0045070biological_processpositive regulation of viral genome replication
F0046790molecular_functionvirion binding
F0050714biological_processpositive regulation of protein secretion
F0051082molecular_functionunfolded protein binding
F0051092biological_processpositive regulation of NF-kappaB transcription factor activity
F0060352biological_processcell adhesion molecule production
F0061944biological_processnegative regulation of protein K48-linked ubiquitination
F0070062cellular_componentextracellular exosome
F0070527biological_processplatelet aggregation
F0140839molecular_functionRNA polymerase II CTD heptapeptide repeat P3 isomerase activity
F0140840molecular_functionRNA polymerase II CTD heptapeptide repeat P6 isomerase activity
F1902176biological_processnegative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
F1903901biological_processnegative regulation of viral life cycle
F1904399molecular_functionheparan sulfate binding
F1904813cellular_componentficolin-1-rich granule lumen
F2001233biological_processregulation of apoptotic signaling pathway
Functional Information from PROSITE/UniProt
site_idPS00170
Number of Residues18
DetailsCSA_PPIASE_1 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. YkgScFHRIIpgFMcQGG
ChainResidueDetails
ATYR1048-GLY1065

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsMOD_RES: N-acetylmethionine => ECO:0007744|PubMed:19413330, ECO:0007744|PubMed:22223895, ECO:0007744|PubMed:22814378, ECO:0007744|PubMed:25944712
ChainResidueDetails
AVAL1002
BVAL1002
CVAL1002
DVAL1002
EVAL1002
FVAL1002

site_idSWS_FT_FI2
Number of Residues6
DetailsMOD_RES: N-acetylvaline; partial; in Peptidyl-prolyl cis-trans isomerase A, N-terminally processed => ECO:0000269|PubMed:25489052, ECO:0000269|Ref.12, ECO:0007744|PubMed:19413330, ECO:0007744|PubMed:25944712
ChainResidueDetails
AASN1003
BASN1003
CASN1003
DASN1003
EASN1003
FASN1003

site_idSWS_FT_FI3
Number of Residues12
DetailsMOD_RES: N6-acetyllysine; alternate => ECO:0007744|PubMed:19608861
ChainResidueDetails
AVAL1029
EPHE1083
FVAL1029
FPHE1083
APHE1083
BVAL1029
BPHE1083
CVAL1029
CPHE1083
DVAL1029
DPHE1083
EVAL1029

site_idSWS_FT_FI4
Number of Residues18
DetailsMOD_RES: N6-acetyllysine => ECO:0007744|PubMed:19608861
ChainResidueDetails
AGLY1045
DGLY1045
DSER1077
DVAL1132
EGLY1045
ESER1077
EVAL1132
FGLY1045
FSER1077
FVAL1132
ASER1077
AVAL1132
BGLY1045
BSER1077
BVAL1132
CGLY1045
CSER1077
CVAL1132

site_idSWS_FT_FI5
Number of Residues6
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:23186163
ChainResidueDetails
AILE1078
BILE1078
CILE1078
DILE1078
EILE1078
FILE1078

site_idSWS_FT_FI6
Number of Residues6
DetailsMOD_RES: Phosphothreonine => ECO:0007744|PubMed:20068231
ChainResidueDetails
AGLY1094
BGLY1094
CGLY1094
DGLY1094
EGLY1094
FGLY1094

site_idSWS_FT_FI7
Number of Residues6
DetailsMOD_RES: N6-acetyllysine => ECO:0000269|PubMed:20364129, ECO:0000269|PubMed:25678563, ECO:0007744|PubMed:19608861
ChainResidueDetails
AHIS1126
BHIS1126
CHIS1126
DHIS1126
EHIS1126
FHIS1126

site_idSWS_FT_FI8
Number of Residues6
DetailsMOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:P17742
ChainResidueDetails
AGLU1134
BGLU1134
CGLU1134
DGLU1134
EGLU1134
FGLU1134

site_idSWS_FT_FI9
Number of Residues6
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
AGLY1109
BGLY1109
CGLY1109
DGLY1109
EGLY1109
FGLY1109

site_idSWS_FT_FI10
Number of Residues6
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate
ChainResidueDetails
AVAL1029
BVAL1029
CVAL1029
DVAL1029
EVAL1029
FVAL1029

site_idSWS_FT_FI11
Number of Residues12
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0007744|PubMed:28112733
ChainResidueDetails
EPHE1083
FPHE1083
APHE1083
BPHE1083
CPHE1083
DPHE1083

Catalytic Information from CSA
site_idMCSA1
Number of Residues7
DetailsM-CSA 189
ChainResidueDetails
AILE1056electrostatic stabiliser, hydrogen bond donor, steric role
AMSE1061polar/non-polar interaction, steric role
AGLY1064electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor
AALA1103electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor
AILE1114polar/non-polar interaction, steric role
AASP1123polar/non-polar interaction, steric role
AVAL1127polar/non-polar interaction, steric role

site_idMCSA2
Number of Residues7
DetailsM-CSA 189
ChainResidueDetails
BILE1056electrostatic stabiliser, hydrogen bond donor, steric role
BMSE1061polar/non-polar interaction, steric role
BGLY1064electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor
BALA1103electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor
BILE1114polar/non-polar interaction, steric role
BASP1123polar/non-polar interaction, steric role
BVAL1127polar/non-polar interaction, steric role

site_idMCSA3
Number of Residues7
DetailsM-CSA 189
ChainResidueDetails
CILE1056electrostatic stabiliser, hydrogen bond donor, steric role
CMSE1061polar/non-polar interaction, steric role
CGLY1064electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor
CALA1103electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor
CILE1114polar/non-polar interaction, steric role
CASP1123polar/non-polar interaction, steric role
CVAL1127polar/non-polar interaction, steric role

site_idMCSA4
Number of Residues7
DetailsM-CSA 189
ChainResidueDetails
DILE1056electrostatic stabiliser, hydrogen bond donor, steric role
DMSE1061polar/non-polar interaction, steric role
DGLY1064electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor
DALA1103electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor
DILE1114polar/non-polar interaction, steric role
DASP1123polar/non-polar interaction, steric role
DVAL1127polar/non-polar interaction, steric role

site_idMCSA5
Number of Residues7
DetailsM-CSA 189
ChainResidueDetails
EILE1056electrostatic stabiliser, hydrogen bond donor, steric role
EMSE1061polar/non-polar interaction, steric role
EGLY1064electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor
EALA1103electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor
EILE1114polar/non-polar interaction, steric role
EASP1123polar/non-polar interaction, steric role
EVAL1127polar/non-polar interaction, steric role

site_idMCSA6
Number of Residues7
DetailsM-CSA 189
ChainResidueDetails
FILE1056electrostatic stabiliser, hydrogen bond donor, steric role
FMSE1061polar/non-polar interaction, steric role
FGLY1064electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor
FALA1103electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor
FILE1114polar/non-polar interaction, steric role
FASP1123polar/non-polar interaction, steric role
FVAL1127polar/non-polar interaction, steric role

227344

PDB entries from 2024-11-13

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