1A4S
BETAINE ALDEHYDE DEHYDROGENASE FROM COD LIVER
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0004029 | molecular_function | aldehyde dehydrogenase (NAD+) activity |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0005829 | cellular_component | cytosol |
| A | 0016491 | molecular_function | oxidoreductase activity |
| A | 0016620 | molecular_function | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
| A | 0045329 | biological_process | carnitine biosynthetic process |
| A | 0047105 | molecular_function | 4-trimethylammoniobutyraldehyde dehydrogenase activity |
| B | 0004029 | molecular_function | aldehyde dehydrogenase (NAD+) activity |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0005829 | cellular_component | cytosol |
| B | 0016491 | molecular_function | oxidoreductase activity |
| B | 0016620 | molecular_function | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
| B | 0045329 | biological_process | carnitine biosynthetic process |
| B | 0047105 | molecular_function | 4-trimethylammoniobutyraldehyde dehydrogenase activity |
| C | 0004029 | molecular_function | aldehyde dehydrogenase (NAD+) activity |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0005829 | cellular_component | cytosol |
| C | 0016491 | molecular_function | oxidoreductase activity |
| C | 0016620 | molecular_function | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
| C | 0045329 | biological_process | carnitine biosynthetic process |
| C | 0047105 | molecular_function | 4-trimethylammoniobutyraldehyde dehydrogenase activity |
| D | 0004029 | molecular_function | aldehyde dehydrogenase (NAD+) activity |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0005829 | cellular_component | cytosol |
| D | 0016491 | molecular_function | oxidoreductase activity |
| D | 0016620 | molecular_function | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
| D | 0045329 | biological_process | carnitine biosynthetic process |
| D | 0047105 | molecular_function | 4-trimethylammoniobutyraldehyde dehydrogenase activity |
Functional Information from PROSITE/UniProt
| site_id | PS00070 |
| Number of Residues | 12 |
| Details | ALDEHYDE_DEHYDR_CYS Aldehyde dehydrogenases cysteine active site. FlTQGQVCTNGT |
| Chain | Residue | Details |
| A | PHE290-THR301 |
| site_id | PS00687 |
| Number of Residues | 8 |
| Details | ALDEHYDE_DEHYDR_GLU Aldehyde dehydrogenases glutamic acid active site. LELGGKSP |
| Chain | Residue | Details |
| A | LEU262-PRO269 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 4 |
| Details | Active site: {"description":"Proton acceptor","evidences":[{"source":"PROSITE-ProRule","id":"PRU10007","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 4 |
| Details | Active site: {"description":"Nucleophile","evidences":[{"source":"PROSITE-ProRule","id":"PRU10008","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 24 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"9792097","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1BPW","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 4 |
| Details | Site: {"description":"Transition state stabilizer"} |
| Chain | Residue | Details |
Catalytic Information from CSA
| site_id | CSA1 |
| Number of Residues | 5 |
| Details | a catalytic site defined by CSA, PubMed 9792097, 19013472 |
| Chain | Residue | Details |
| A | CYS297 | |
| A | CYS297 | |
| A | GLU263 | |
| A | ASN166 | |
| A | GLU477 |
| site_id | MCSA1 |
| Number of Residues | 4 |
| Details | M-CSA 100 |
| Chain | Residue | Details |
| A | ASN166 | electrostatic stabiliser, hydrogen bond donor |
| A | GLU263 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
| A | CYS297 | covalently attached, nucleofuge, nucleophile |
| A | GLU477 | proton acceptor, proton donor, proton relay |
| site_id | MCSA2 |
| Number of Residues | 4 |
| Details | M-CSA 100 |
| Chain | Residue | Details |
| B | ASN166 | electrostatic stabiliser, hydrogen bond donor |
| B | GLU263 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
| B | CYS297 | covalently attached, nucleofuge, nucleophile |
| B | GLU477 | proton acceptor, proton donor, proton relay |
| site_id | MCSA3 |
| Number of Residues | 4 |
| Details | M-CSA 100 |
| Chain | Residue | Details |
| C | ASN166 | electrostatic stabiliser, hydrogen bond donor |
| C | GLU263 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
| C | CYS297 | covalently attached, nucleofuge, nucleophile |
| C | GLU477 | proton acceptor, proton donor, proton relay |
| site_id | MCSA4 |
| Number of Residues | 4 |
| Details | M-CSA 100 |
| Chain | Residue | Details |
| D | ASN166 | electrostatic stabiliser, hydrogen bond donor |
| D | GLU263 | hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
| D | CYS297 | covalently attached, nucleofuge, nucleophile |
| D | GLU477 | proton acceptor, proton donor, proton relay |
