11DV

RNA Vault waist region, focused refinement (MVP/TEP1 sample)

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005515	molecular_function	protein binding
A	0005576	cellular_component	extracellular region
A	0005634	cellular_component	nucleus
A	0005643	cellular_component	nuclear pore
A	0005737	cellular_component	cytoplasm
A	0005829	cellular_component	cytosol
A	0005856	cellular_component	cytoskeleton
A	0007165	biological_process	signal transduction
A	0008283	biological_process	cell population proliferation
A	0015031	biological_process	protein transport
A	0016020	cellular_component	membrane
A	0019901	molecular_function	protein kinase binding
A	0019903	molecular_function	protein phosphatase binding
A	0034774	cellular_component	secretory granule lumen
A	0035556	biological_process	intracellular signal transduction
A	0038127	biological_process	ERBB signaling pathway
A	0042059	biological_process	negative regulation of epidermal growth factor receptor signaling pathway
A	0042802	molecular_function	identical protein binding
A	0048471	cellular_component	perinuclear region of cytoplasm
A	0070062	cellular_component	extracellular exosome
A	0072376	biological_process	protein activation cascade
A	1904813	cellular_component	ficolin-1-rich granule lumen
A	1990904	cellular_component	ribonucleoprotein complex
B	0005515	molecular_function	protein binding
B	0005576	cellular_component	extracellular region
B	0005634	cellular_component	nucleus
B	0005643	cellular_component	nuclear pore
B	0005737	cellular_component	cytoplasm
B	0005829	cellular_component	cytosol
B	0005856	cellular_component	cytoskeleton
B	0007165	biological_process	signal transduction
B	0008283	biological_process	cell population proliferation
B	0015031	biological_process	protein transport
B	0016020	cellular_component	membrane
B	0019901	molecular_function	protein kinase binding
B	0019903	molecular_function	protein phosphatase binding
B	0034774	cellular_component	secretory granule lumen
B	0035556	biological_process	intracellular signal transduction
B	0038127	biological_process	ERBB signaling pathway
B	0042059	biological_process	negative regulation of epidermal growth factor receptor signaling pathway
B	0042802	molecular_function	identical protein binding
B	0048471	cellular_component	perinuclear region of cytoplasm
B	0070062	cellular_component	extracellular exosome
B	0072376	biological_process	protein activation cascade
B	1904813	cellular_component	ficolin-1-rich granule lumen
B	1990904	cellular_component	ribonucleoprotein complex
C	0005515	molecular_function	protein binding
C	0005576	cellular_component	extracellular region
C	0005634	cellular_component	nucleus
C	0005643	cellular_component	nuclear pore
C	0005737	cellular_component	cytoplasm
C	0005829	cellular_component	cytosol
C	0005856	cellular_component	cytoskeleton
C	0007165	biological_process	signal transduction
C	0008283	biological_process	cell population proliferation
C	0015031	biological_process	protein transport
C	0016020	cellular_component	membrane
C	0019901	molecular_function	protein kinase binding
C	0019903	molecular_function	protein phosphatase binding
C	0034774	cellular_component	secretory granule lumen
C	0035556	biological_process	intracellular signal transduction
C	0038127	biological_process	ERBB signaling pathway
C	0042059	biological_process	negative regulation of epidermal growth factor receptor signaling pathway
C	0042802	molecular_function	identical protein binding
C	0048471	cellular_component	perinuclear region of cytoplasm
C	0070062	cellular_component	extracellular exosome
C	0072376	biological_process	protein activation cascade
C	1904813	cellular_component	ficolin-1-rich granule lumen
C	1990904	cellular_component	ribonucleoprotein complex
D	0005515	molecular_function	protein binding
D	0005576	cellular_component	extracellular region
D	0005634	cellular_component	nucleus
D	0005643	cellular_component	nuclear pore
D	0005737	cellular_component	cytoplasm
D	0005829	cellular_component	cytosol
D	0005856	cellular_component	cytoskeleton
D	0007165	biological_process	signal transduction
D	0008283	biological_process	cell population proliferation
D	0015031	biological_process	protein transport
D	0016020	cellular_component	membrane
D	0019901	molecular_function	protein kinase binding
D	0019903	molecular_function	protein phosphatase binding
D	0034774	cellular_component	secretory granule lumen
D	0035556	biological_process	intracellular signal transduction
D	0038127	biological_process	ERBB signaling pathway
D	0042059	biological_process	negative regulation of epidermal growth factor receptor signaling pathway
D	0042802	molecular_function	identical protein binding
D	0048471	cellular_component	perinuclear region of cytoplasm
D	0070062	cellular_component	extracellular exosome
D	0072376	biological_process	protein activation cascade
D	1904813	cellular_component	ficolin-1-rich granule lumen
D	1990904	cellular_component	ribonucleoprotein complex
E	0005515	molecular_function	protein binding
E	0005576	cellular_component	extracellular region
E	0005634	cellular_component	nucleus
E	0005643	cellular_component	nuclear pore
E	0005737	cellular_component	cytoplasm
E	0005829	cellular_component	cytosol
E	0005856	cellular_component	cytoskeleton
E	0007165	biological_process	signal transduction
E	0008283	biological_process	cell population proliferation
E	0015031	biological_process	protein transport
E	0016020	cellular_component	membrane
E	0019901	molecular_function	protein kinase binding
E	0019903	molecular_function	protein phosphatase binding
E	0034774	cellular_component	secretory granule lumen
E	0035556	biological_process	intracellular signal transduction
E	0038127	biological_process	ERBB signaling pathway
E	0042059	biological_process	negative regulation of epidermal growth factor receptor signaling pathway
E	0042802	molecular_function	identical protein binding
E	0048471	cellular_component	perinuclear region of cytoplasm
E	0070062	cellular_component	extracellular exosome
E	0072376	biological_process	protein activation cascade
E	1904813	cellular_component	ficolin-1-rich granule lumen
E	1990904	cellular_component	ribonucleoprotein complex
F	0005515	molecular_function	protein binding
F	0005576	cellular_component	extracellular region
F	0005634	cellular_component	nucleus
F	0005643	cellular_component	nuclear pore
F	0005737	cellular_component	cytoplasm
F	0005829	cellular_component	cytosol
F	0005856	cellular_component	cytoskeleton
F	0007165	biological_process	signal transduction
F	0008283	biological_process	cell population proliferation
F	0015031	biological_process	protein transport
F	0016020	cellular_component	membrane
F	0019901	molecular_function	protein kinase binding
F	0019903	molecular_function	protein phosphatase binding
F	0034774	cellular_component	secretory granule lumen
F	0035556	biological_process	intracellular signal transduction
F	0038127	biological_process	ERBB signaling pathway
F	0042059	biological_process	negative regulation of epidermal growth factor receptor signaling pathway
F	0042802	molecular_function	identical protein binding
F	0048471	cellular_component	perinuclear region of cytoplasm
F	0070062	cellular_component	extracellular exosome
F	0072376	biological_process	protein activation cascade
F	1904813	cellular_component	ficolin-1-rich granule lumen
F	1990904	cellular_component	ribonucleoprotein complex

Functional Information from PROSITE/UniProt

site_id	PS00018
Number of Residues	13
Details	EF_HAND_1 EF-hand calcium-binding domain. DKDGDKVVAgdEW

Chain	Residue	Details
A	ASP131-TRP143

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Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	366
Details	Repeat: {"description":"MVP 2","evidences":[{"source":"PubMed","id":"40691181","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"9BW5","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"9BW6","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"9BW7","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"9MXH","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"9MXJ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"9MXV","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

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site_id	SWS_FT_FI2
Number of Residues	156
Details	Repeat: {"description":"MVP 3","evidences":[{"source":"PubMed","id":"40691181","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"9BW5","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"9BW6","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"9BW7","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"9MXH","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"9MXJ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"9MXV","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

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site_id	SWS_FT_FI3
Number of Residues	156
Details	Repeat: {"description":"MVP 4","evidences":[{"source":"PubMed","id":"40691181","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"9BW5","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"9BW6","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"9BW7","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"9MXH","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"9MXJ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"9MXV","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

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