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9YT9

A428D mutant of Bruton's tyrosine kinase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-1
Synchrotron siteESRF
BeamlineMASSIF-1
Temperature [K]100
Detector technologyPIXEL
Collection date2025-02-25
DetectorDECTRIS PILATUS4 X 4M
Wavelength(s)0.96546
Spacegroup nameP 2 21 21
Unit cell lengths38.057, 71.566, 106.704
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution42.770 - 1.800
R-factor0.2067
Rwork0.204
R-free0.23840
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle0.774
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.21.2_5419)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]42.7701.968
High resolution limit [Å]1.8001.800
Rpim0.0521.086
Number of reflections2779911443
<I/σ(I)>8.40.7
Completeness [%]99.999.7
Redundancy77.1
CC(1/2)0.9970.304
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29312.5% MPD, 12.5% PEG 1000, 12.5% PEG 3350, 20 mM D-Glucose, 20 mM D-Mannose, 20 mM D-Galactose, 20 mM L-Fucose, 20 mM D-Xylose, 20 mM N-Acetyl-D-Glucosamine, 100 mM Tris, 100 mM BICINE

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PDB entries from 2026-08-26

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