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9YP2

Structure of HaCV P domain in complex with Nanobody 7

This is a non-PDB format compatible entry.
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX3
Synchrotron siteAustralian Synchrotron
BeamlineMX3
Temperature [K]100
Detector technologyPIXEL
Collection date2025-07-18
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.953720
Spacegroup nameC 1 2 1
Unit cell lengths214.250, 73.510, 59.250
Unit cell angles90.00, 94.11, 90.00
Refinement procedure
Resolution29.660 - 2.090
R-factor0.1837
Rwork0.182
R-free0.22250
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle0.886
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]29.6602.140
High resolution limit [Å]2.0902.090
Rmerge0.1140.754
Rmeas0.843
Rpim0.371
Number of reflections538563903
<I/σ(I)>10.741.9
Completeness [%]98.696.9
Redundancy5.035
CC(1/2)0.9980.667
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP291.150.2 M Sodium fluoride, 20% PEG3350

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