Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9YGW

Perdeuterated E. coli YajL, 100K

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL12-2
Synchrotron siteSSRL
BeamlineBL12-2
Temperature [K]100
Detector technologyPIXEL
Collection date2020-10-24
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.729
Spacegroup nameP 21 21 21
Unit cell lengths43.727, 78.410, 99.510
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.200 - 0.880
R-factor0.1132
Rwork0.113
R-free0.12520
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle1.136
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.21.2_5419)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0300.890
High resolution limit [Å]0.8800.880
Rmeas0.0602.642
Number of reflections26986813123
<I/σ(I)>16
Completeness [%]99.9
Redundancy7.9
CC(1/2)1.0000.395
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29516-18% PEG 4000, 225 mM MgCl2, and 100 mM Tris HCl, pH=8.1

248636

PDB entries from 2026-02-04

PDB statisticsPDBj update infoContact PDBjnumon