9YDF
Structure of the cyclic nucleotide binding domain of SLC9C1
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 5.0.1 |
| Synchrotron site | ALS |
| Beamline | 5.0.1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2024-12-11 |
| Detector | DECTRIS PILATUS 2M |
| Wavelength(s) | 0.97648 |
| Spacegroup name | P 61 2 2 |
| Unit cell lengths | 45.788, 45.788, 276.932 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 46.160 - 2.180 |
| R-factor | 0.20423 |
| Rwork | 0.203 |
| R-free | 0.23745 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.005 |
| RMSD bond angle | 1.461 |
| Data reduction software | HKL-3000 |
| Data scaling software | HKL-3000 |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0430) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.220 |
| High resolution limit [Å] | 2.180 | 5.910 | 2.180 |
| Rmerge | 0.085 | 0.053 | 0.974 |
| Rmeas | 0.087 | 0.054 | 0.994 |
| Rpim | 0.016 | 0.011 | 0.194 |
| Total number of observations | 286680 | ||
| Number of reflections | 9891 | 638 | 431 |
| <I/σ(I)> | 6.3 | ||
| Completeness [%] | 99.4 | 99.8 | 95.1 |
| Redundancy | 29 | 23.3 | 24.8 |
| CC(1/2) | 0.999 | 0.999 | 0.892 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 277 | 20% (w/v) polyethylene glycol (PEG) 3350, 0.2 M Calcium chloride dihydrate |






