Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9Y6M

Avermitilol synthase: Complex with Mg, inorganic pyrophosphate, and adamantane cation

This is a non-PDB format compatible entry.
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS-II BEAMLINE 17-ID-2
Synchrotron siteNSLS-II
Beamline17-ID-2
Temperature [K]100
Detector technologyPIXEL
Collection date2025-07-25
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.98
Spacegroup nameC 1 2 1
Unit cell lengths95.552, 56.250, 72.766
Unit cell angles90.00, 125.30, 90.00
Refinement procedure
Resolution29.940 - 1.420
R-factor0.1613
Rwork0.160
R-free0.20070
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle0.773
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]29.9401.440
High resolution limit [Å]1.4201.420
Rmerge0.1041.142
Rpim0.0510.628
Number of reflections576152971
<I/σ(I)>7.91.2
Completeness [%]96.4
Redundancy4.7
CC(1/2)0.9970.457
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2778 mg/mL avermitilol synthase, 0.1 M bis-tris propane (pH 8.5-9.4), 30%PEG 6000, and 0.3-0.5% n-dodecyl-beta-D-maltoside

250059

PDB entries from 2026-03-04

PDB statisticsPDBj update infoContact PDBjnumon