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9WT3

NRBF2 coiled coil domain promotes autophagy by strengthening association with Vps15 in the PI3KC3 complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]289
Detector technologyIMAGE PLATE
Collection date2025-05-15
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.5418
Spacegroup nameC 2 2 21
Unit cell lengths84.529, 132.810, 87.290
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution43.680 - 2.250
R-factor0.21818
Rwork0.216
R-free0.26300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)in-house SeMet derivative model
RMSD bond length0.007
RMSD bond angle1.793
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0425)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]87.2902.370
High resolution limit [Å]2.2502.250
Rmerge0.0510.148
Number of reflections236043380
<I/σ(I)>33.7
Completeness [%]100.099.8
Redundancy12.412
CC(1/2)0.999
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2893.916 M NaCl and 0.1 M Tris buffer (pH 7.0)

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PDB entries from 2025-11-12

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