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9VKF

Crystal structure of yeast arginine N-methyltransferase 1,HMT1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL02U1
Synchrotron siteSSRF
BeamlineBL02U1
Temperature [K]100
Detector technologyCCD
Collection date2025-04-03
DetectorADSC QUANTUM 315r
Wavelength(s)0.97
Spacegroup nameP 31
Unit cell lengths84.670, 84.670, 97.720
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution34.330 - 2.850
R-factor0.2349
Rwork0.235
R-free0.28370
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.004
RMSD bond angle0.690
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwarePHASER
Refinement softwarePHENIX ((1.20.1_4487: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]42.3302.920
High resolution limit [Å]2.8502.850
Rmerge0.2681.130
Number of reflections183351379
<I/σ(I)>15.2
Completeness [%]100.0
Redundancy10.1
CC(1/2)0.9930.811
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION289.150.15 M DL-Malic acid pH 7.0, 20% w/v Polyethylene glycol 3,350

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PDB entries from 2025-07-16

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