9UK3
Crystal structure of WDR5 in complex with peptide Ac-MRTEPRPPAP-NH2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2024-06-23 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.979 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 41.072, 80.972, 84.539 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 58.480 - 1.690 |
R-factor | 0.1699 |
Rwork | 0.168 |
R-free | 0.19950 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.981 |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 58.480 | 1.790 |
High resolution limit [Å] | 1.690 | 1.690 |
Number of reflections | 31858 | 4615 |
<I/σ(I)> | 17.4 | |
Completeness [%] | 99.2 | |
Redundancy | 9.7 | |
CC(1/2) | 0.999 | 0.948 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291.15 | 0.1 M BIS-TRIS pH 5.5, 25% w/v Polyethylene glycol 3,350 |