Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9UDY

Crystal structure of recombinant mushroom Agaricus bisporus mannose-binding protein with a longer C-terminal region

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-5A
Synchrotron sitePhoton Factory
BeamlineBL-5A
Temperature [K]100
Detector technologyPIXEL
Collection date2024-03-08
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths40.164, 43.982, 67.247
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution36.810 - 1.510
R-factor0.13511
Rwork0.132
R-free0.19376
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5eha
RMSD bond length0.007
RMSD bond angle1.365
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]43.9801.540
High resolution limit [Å]1.5101.510
Rmerge0.0480.649
Rmeas0.0520.743
Rpim0.0210.356
Total number of observations1192873940
Number of reflections19365946
<I/σ(I)>21.32
Completeness [%]100.0
Redundancy6.24.2
CC(1/2)1.0000.778
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7293sodium formate

237735

PDB entries from 2025-06-18

PDB statisticsPDBj update infoContact PDBjnumon