9UDN
Single-chain Fv antibody of F8
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SPRING-8 BEAMLINE BL32XU |
| Synchrotron site | SPring-8 |
| Beamline | BL32XU |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2023-10-25 |
| Detector | DECTRIS EIGER X 9M |
| Wavelength(s) | 1.0000 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 135.730, 35.140, 46.450 |
| Unit cell angles | 90.00, 99.63, 90.00 |
Refinement procedure
| Resolution | 45.800 - 1.810 |
| R-factor | 0.1825 |
| Rwork | 0.180 |
| R-free | 0.22030 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.015 |
| RMSD bond angle | 1.436 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 1.920 |
| High resolution limit [Å] | 1.810 | 1.810 |
| Rmerge | 0.166 | 1.545 |
| Number of reflections | 19851 | 3194 |
| <I/σ(I)> | 7.8 | 1.4 |
| Completeness [%] | 99.5 | |
| Redundancy | 6.6 | |
| CC(1/2) | 0.595 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1 M HEPES sodium pH 7.5, 1.4 M sodium citrate tribasic dihydrate |






