9U8H
Crystal structure of Leminorella grimontii GatC in the absence of D-xylose
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL32XU |
Synchrotron site | SPring-8 |
Beamline | BL32XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-02-03 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1.0 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 87.870, 100.840, 122.880 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.650 - 3.740 |
R-factor | 0.2568 |
Rwork | 0.254 |
R-free | 0.28550 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.004 |
RMSD bond angle | 0.635 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.650 | 3.910 |
High resolution limit [Å] | 3.740 | 3.740 |
Number of reflections | 11682 | 2801 |
<I/σ(I)> | 3.03 | |
Completeness [%] | 99.1 | |
Redundancy | 41.6 | |
CC(1/2) | 0.859 | 0.281 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 8 | 293.15 | 100 mM Na-acetate, 100 mM Tris-HCl (pH8.0), 40-45% PEG200 |