9SPO
p53 cancer mutant Y220C in complex with DARPin C10
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SLS BEAMLINE X06DA |
| Synchrotron site | SLS |
| Beamline | X06DA |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2023-02-06 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 37.765, 93.844, 53.311 |
| Unit cell angles | 90.00, 110.17, 90.00 |
Refinement procedure
| Resolution | 46.900 - 1.480 |
| R-factor | 0.150063819095 |
| Rwork | 0.148 |
| R-free | 0.18184 |
| Structure solution method | FOURIER SYNTHESIS |
| RMSD bond length | 0.005 |
| RMSD bond angle | 0.737 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHENIX |
| Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 46.900 | 1.510 |
| High resolution limit [Å] | 1.480 | 1.480 |
| Rmerge | 0.049 | 0.531 |
| Rpim | 0.023 | 0.303 |
| Number of reflections | 57810 | 2747 |
| <I/σ(I)> | 15.7 | 2.3 |
| Completeness [%] | 99.7 | 96 |
| Redundancy | 5 | 3.9 |
| CC(1/2) | 0.999 | 0.839 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | Protein solution: 2.3 mg/ml DARPin-p53 complex in 25 mM HEPES pH 7.5, 150 mM NaCl, 0.5 mM TCEP. Reservoir solution: 20% PEG3350, 10% ethylene glycol, 0.1 M bis-tris-propane pH 8.5, 0.2 M sodium formate. Drop volume ratio 2:1. |






