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9SPO

p53 cancer mutant Y220C in complex with DARPin C10

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Temperature [K]100
Detector technologyPIXEL
Collection date2023-02-06
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.0
Spacegroup nameP 1 21 1
Unit cell lengths37.765, 93.844, 53.311
Unit cell angles90.00, 110.17, 90.00
Refinement procedure
Resolution46.900 - 1.480
R-factor0.150063819095
Rwork0.148
R-free0.18184
Structure solution methodFOURIER SYNTHESIS
RMSD bond length0.005
RMSD bond angle0.737
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHENIX
Refinement softwarePHENIX (1.10.1_2155)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.9001.510
High resolution limit [Å]1.4801.480
Rmerge0.0490.531
Rpim0.0230.303
Number of reflections578102747
<I/σ(I)>15.72.3
Completeness [%]99.796
Redundancy53.9
CC(1/2)0.9990.839
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293Protein solution: 2.3 mg/ml DARPin-p53 complex in 25 mM HEPES pH 7.5, 150 mM NaCl, 0.5 mM TCEP. Reservoir solution: 20% PEG3350, 10% ethylene glycol, 0.1 M bis-tris-propane pH 8.5, 0.2 M sodium formate. Drop volume ratio 2:1.

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