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9SJH

Crystal structure of apo GHdex dextranase (BT3087), E360A catalytic mutant

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I24
Synchrotron siteDiamond
BeamlineI24
Temperature [K]100
Detector technologyPIXEL
Collection date2021-06-26
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.97940
Spacegroup nameP 41 21 2
Unit cell lengths92.862, 92.862, 330.684
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution89.404 - 2.100
Rwork0.190
R-free0.22950
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle1.791
Data reduction softwareDIALS
Data scaling softwareAimless
Phasing softwareMrBUMP
Refinement softwareREFMAC (5.8.0430 (refmacat 0.4.88))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]330.680330.6802.140
High resolution limit [Å]2.10011.1102.100
Rmerge0.8920.124
Rmeas0.9270.12917.905
Rpim0.2510.0345.021
Number of reflections857407374460
<I/σ(I)>5.915.61.2
Completeness [%]100.0100100
Redundancy25.921.224.7
CC(1/2)0.9900.9890.700
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.62932M ammonium sulphate 0.2M Potassium sodium tartrate 0.1M sodium citrate pH 5.6

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PDB entries from 2026-08-05

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