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9SJ6

Structure of the Clostridioides difficile CspB protease

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALBA BEAMLINE XALOC
Synchrotron siteALBA
BeamlineXALOC
Temperature [K]100
Detector technologyPIXEL
Collection date2025-03-20
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97926
Spacegroup nameC 2 2 21
Unit cell lengths101.909, 115.726, 201.690
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.400 - 1.940
R-factor0.2203
Rwork0.218
R-free0.25760
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle1.022
Data reduction softwareautoPROC
Data scaling softwareAimless
Phasing softwareMOLREP
Refinement softwarePHENIX ((1.20_4459: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.4001.970
High resolution limit [Å]1.9401.940
Number of reflections882324488
<I/σ(I)>18.8
Completeness [%]100.0
Redundancy13.4
CC(1/2)0.9900.888
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2910.2 M NaCl, 0.1 M Sodium Acetate trihydrate (pH 4.6) and 30% MPD

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PDB entries from 2026-07-01

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