Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

9S9Y

Structure of protein kinase CK2alpha in complex with AMPPNP crystallized in space group P43212

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P13 (MX1)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP13 (MX1)
Temperature [K]100
Detector technologyPIXEL
Collection date2024-02-15
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.96770
Spacegroup nameP 43 21 2
Unit cell lengths128.019, 128.019, 124.164
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution73.150 - 1.860
R-factor0.177
Rwork0.175
R-free0.22150
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.013
RMSD bond angle1.228
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]89.1292.081
High resolution limit [Å]1.8601.860
Rmerge0.3643.154
Number of reflections600433002
<I/σ(I)>7.61.7
Completeness [%]69.4
Redundancy19.3
CC(1/2)0.9930.696
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293Reservoir: 200 mM Li2SO4, 100 mM Bis-Tris/HCl, pH 6.5, 25 % PEG3350 Protein: 5 mg/mL in 500 mM NaCl, 25 mM Tris/HCl, pH 8.5 Drop: 2 to ratio of protein to reservoir Soaking with AMPPNO and MgCl2

258222

PDB entries from 2026-08-19

PDB statisticsPDBj update infoContact PDBjnumon