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9RF1

Structure of human GPX4-U46C-R152K mutant

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-2
Synchrotron siteESRF
BeamlineID23-2
Temperature [K]100
Detector technologyPIXEL
Collection date2025-05-09
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.8731
Spacegroup nameP 1 21 1
Unit cell lengths35.392, 62.952, 75.442
Unit cell angles90.00, 100.79, 90.00
Refinement procedure
Resolution37.000 - 1.900
R-factor0.2187
Rwork0.215
R-free0.28370
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle0.826
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.21.2_5419)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]37.0001.970
High resolution limit [Å]1.9001.900
Number of reflections889912547
<I/σ(I)>3.19
Completeness [%]98.7
Redundancy3.5
CC(1/2)0.9170.316
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2950.2M Ammonium acetate 0.1M BIS-Tris ph 5.5 25% w/v PEG 3350

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PDB entries from 2025-12-03

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