9QY1
Endo180 (uPARAP) carbohydrate-recognition domain 2 with bound methyl fucoside
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRL BEAMLINE BL12-1 |
| Synchrotron site | SSRL |
| Beamline | BL12-1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-12-23 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.97946 |
| Spacegroup name | P 21 21 2 |
| Unit cell lengths | 45.650, 66.560, 37.230 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 37.650 - 1.900 |
| R-factor | 0.1865 |
| Rwork | 0.184 |
| R-free | 0.23860 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.805 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 40.000 | 1.970 |
| High resolution limit [Å] | 1.900 | 1.900 |
| Number of reflections | 9435 | 922 |
| <I/σ(I)> | 21.08 | |
| Completeness [%] | 100.0 | 100 |
| Redundancy | 24.7 | 22.4 |
| CC(1/2) | 0.990 | 0.992 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 8 | 289.5 | Drop: 5.2 mg/ml protein 5 mM CaCl2 10 mM Tris-Cl, pH 8.0 25mM NaCl 50mM alpha-Methyl-Fucoside Reservoir 26% polyethylene glycol 8K 0.1 M Tris-Cl, pH 8.0. |






