9QM5
Krypton-pressurized Methyl-Coenzyme M reductase of an ANME-2c isolated from a microbial enrichment
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-07-18 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.86100 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 153.478, 153.673, 212.885 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 54.300 - 1.800 |
R-factor | 0.1306 |
Rwork | 0.129 |
R-free | 0.15520 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 1.170 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 59.400 | 1.830 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.127 | 1.623 |
Rmeas | 0.137 | 1.748 |
Rpim | 0.051 | 0.646 |
Number of reflections | 461593 | 22707 |
<I/σ(I)> | 14.1 | 1.8 |
Completeness [%] | 100.0 | 100 |
Redundancy | 13.8 | 14.2 |
CC(1/2) | 0.999 | 0.768 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293.15 | Crystallization was carried out on a Clover junior plate using a crystallization solution containing 30% v/v polyethylene glycol 400, 100 mM HEPES pH 7.5, and 200 mM magnesium chloride. Crystals were pressurized at 214 bars of krypton for 2 min before flash freezing in liquid nitrogen. |