9QE3
Structure of native leukocyte myeloperoxidase in complex with a truncated version of the Staphylococcal Peroxidase Inhibitor SPIN and selenocyanate at pH 5.5
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 213.15 |
Detector technology | PIXEL |
Collection date | 2023-03-05 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.8856 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 110.507, 110.507, 241.574 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.890 - 2.060 |
Rwork | 0.179 |
R-free | 0.23420 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.904 |
Data reduction software | autoPROC |
Data scaling software | STARANISO |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0430 (refmacat 0.4.100)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 19.890 | 2.303 |
High resolution limit [Å] | 2.058 | 2.058 |
Rmerge | 0.353 | 3.255 |
Rmeas | 0.386 | 3.384 |
Rpim | 0.100 | 0.920 |
Number of reflections | 62476 | 3124 |
<I/σ(I)> | 2.3576 | 1.6 |
Completeness [%] | 94.3 | 65.2 |
Redundancy | 13.4 | 13.4 |
CC(1/2) | 0.993 | 0.540 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 295.15 | 0.1 M Na Acet 5.5 pH (Buffer) 6 %(w/v) PEG 8K (Precipitant) 10 %(w/v) PEG 1K (Precipitant) 0.4 M KSeCN (Salt) |