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9QBD

Crystal structure of Brachyspira hampsonii PadR with Leu88 replaced by 3-aminotyrosine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE MASSIF-1
Synchrotron siteESRF
BeamlineMASSIF-1
Temperature [K]100
Detector technologyPIXEL
Collection date2024-09-26
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.96546
Spacegroup nameP 43 21 2
Unit cell lengths51.595, 51.595, 222.813
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution55.700 - 2.100
R-factor0.2135
Rwork0.212
R-free0.24460
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.010
RMSD bond angle1.010
Data reduction softwareDIALS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.21.2_5419)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]111.4002.160
High resolution limit [Å]2.1002.100
Rmerge0.1181.576
Rmeas0.1221.662
Rpim0.0280.508
Total number of observations33380313149
Number of reflections184621318
<I/σ(I)>13.21.2
Completeness [%]99.0
Redundancy18.110
CC(1/2)0.9990.620
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72940.15 M DL-malic acid pH 7.0, 20% (w/v) PEG 3350

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PDB entries from 2026-03-11

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