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9PTD

Crystal structure of C. elegans PUF-3

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2022-04-02
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.0
Spacegroup nameP 43
Unit cell lengths251.552, 251.552, 39.432
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution44.470 - 3.140
R-factor0.2423
Rwork0.241
R-free0.27510
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.004
RMSD bond angle0.704
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.21.2_5419)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0003.200
High resolution limit [Å]3.1408.5403.150
Rmerge0.1510.0760.940
Rmeas0.1690.0861.041
Rpim0.0740.0380.443
Number of reflections4427124342183
<I/σ(I)>6.6
Completeness [%]99.699.9100
Redundancy5.14.75.4
CC(1/2)0.9790.9880.630
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2960.2 M sodium malonate, pH 6.5, 20% (w/v) PGE 3350

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