9PTD
Crystal structure of C. elegans PUF-3
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 22-ID |
| Synchrotron site | APS |
| Beamline | 22-ID |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2022-04-02 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 43 |
| Unit cell lengths | 251.552, 251.552, 39.432 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 44.470 - 3.140 |
| R-factor | 0.2423 |
| Rwork | 0.241 |
| R-free | 0.27510 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.004 |
| RMSD bond angle | 0.704 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.21.2_5419) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 3.200 |
| High resolution limit [Å] | 3.140 | 8.540 | 3.150 |
| Rmerge | 0.151 | 0.076 | 0.940 |
| Rmeas | 0.169 | 0.086 | 1.041 |
| Rpim | 0.074 | 0.038 | 0.443 |
| Number of reflections | 44271 | 2434 | 2183 |
| <I/σ(I)> | 6.6 | ||
| Completeness [%] | 99.6 | 99.9 | 100 |
| Redundancy | 5.1 | 4.7 | 5.4 |
| CC(1/2) | 0.979 | 0.988 | 0.630 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 296 | 0.2 M sodium malonate, pH 6.5, 20% (w/v) PGE 3350 |






