9OW2
Crystal Structure of the Surface Protein (CD630_07380) from Clostridium difficile Strain 630
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-02-06 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97872 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 42.080, 94.872, 57.093 |
Unit cell angles | 90.00, 89.99, 90.00 |
Refinement procedure
Resolution | 28.550 - 1.850 |
R-factor | 0.18146 |
Rwork | 0.179 |
R-free | 0.22399 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 1.420 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0430) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.880 |
High resolution limit [Å] | 1.850 | 1.850 |
Rmerge | 0.107 | 0.988 |
Rmeas | 0.122 | |
Rpim | 0.059 | 0.548 |
Number of reflections | 37762 | 1871 |
<I/σ(I)> | 13.1 | 1.9 |
Completeness [%] | 100.0 | 100 |
Redundancy | 4.3 | 4.2 |
CC(1/2) | 1.000 | 0.656 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 292 | Protein: 8.4 mg/ml, 0.25M Sodium chloride, 0.01M Tris buffer pH 8.3; Screen: JSCG+ (H8), 0.2M Sodim chloride, 0.1M Bis-Tris pH 5.5, 25% (w/v) PEG 3350; Cryo: 0.2M Sodim chloride, 0.1M Bis-Tris pH 5.5, 25% (w/v) PEG 3350 |