9OQY
X-ray crystal structure of Asp/Ala exchanger AspT at outward-facing conformation
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-05-12 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0 |
Spacegroup name | I 41 2 2 |
Unit cell lengths | 100.688, 100.688, 354.694 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.850 - 3.450 |
R-factor | 0.2542 |
Rwork | 0.252 |
R-free | 0.30500 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.476 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.21.1_5286) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 3.780 |
High resolution limit [Å] | 3.450 | 3.450 |
Rmerge | 0.138 | |
Rmeas | 0.156 | |
Rpim | 0.070 | |
Number of reflections | 11832 | 2825 |
<I/σ(I)> | 9.2 | |
Completeness [%] | 94.6 | 96.6 |
Redundancy | 7.4 | |
CC(1/2) | 0.990 | 0.903 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.9 | 296 | 35% PEG 600, 100 mM cacodylic acid (pH 6.9), 200 mM CaCl2, 50 mM TEAP, 0.015% LMNG |