9OAS
Crystal structure of antibody Fab G001-14 from IAVI G001 human trial in complex with a germline-targeting gp120 engineered outer domain eOD-GT8-mingly-N276
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-1 |
Synchrotron site | SSRL |
Beamline | BL12-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-01-19 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.9795 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 261.056, 75.518, 158.146 |
Unit cell angles | 90.00, 92.36, 90.00 |
Refinement procedure
Resolution | 26.080 - 2.790 |
R-factor | 0.216 |
Rwork | 0.214 |
R-free | 0.25450 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.004 |
RMSD bond angle | 0.710 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.21.2_5419) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.860 |
High resolution limit [Å] | 2.790 | 2.790 |
Number of reflections | 75138 | 3714 |
<I/σ(I)> | 7.7 | |
Completeness [%] | 98.4 | |
Redundancy | 6.8 | |
CC(1/2) | 0.978 | 0.311 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 10% (w/v) PEG 8000, 0.2 M zinc acetate, and 0.1 M MES pH 6.0 |