9OAF
Room temperature structure of human carbonic anhydrase IX mimic in complex with vorinostat (drug soak)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX IV BEAMLINE BioMAX |
Synchrotron site | MAX IV |
Beamline | BioMAX |
Temperature [K] | 293 |
Detector technology | PIXEL |
Collection date | 2024-12-05 |
Detector | DECTRIS EIGER2 X CdTe 16M |
Wavelength(s) | 0.7293 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 42.579, 41.671, 72.582 |
Unit cell angles | 90.00, 104.01, 90.00 |
Refinement procedure
Resolution | 22.930 - 1.400 |
R-factor | 0.155 |
Rwork | 0.154 |
R-free | 0.17400 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.012 |
RMSD bond angle | 1.309 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.21_5207) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 24.730 | 1.450 |
High resolution limit [Å] | 1.400 | 1.400 |
Rmerge | 0.065 | 0.527 |
Rpim | 0.042 | 0.350 |
Number of reflections | 48869 | 3712 |
<I/σ(I)> | 10.4 | 2.5 |
Completeness [%] | 96.2 | 76.9 |
Redundancy | 3.3 | 3.1 |
CC(1/2) | 0.996 | 0.687 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 293 | 50 mM Tris HCl pH 8.0, 1.25 M sodium citrate |