9NTF
Helix pomatia AMP deaminase (HPAMPD) with unknown density in the active site
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-1 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-07-07 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.9201 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 76.344, 82.351, 211.495 |
Unit cell angles | 90.00, 92.29, 90.00 |
Refinement procedure
Resolution | 70.850 - 1.560 |
R-factor | 0.162 |
Rwork | 0.161 |
R-free | 0.18790 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.014 |
RMSD bond angle | 1.252 |
Data reduction software | XDS |
Data scaling software | autoPROC |
Phasing software | PHENIX |
Refinement software | PHENIX (1.21.2_5419) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 70.850 | 1.585 |
High resolution limit [Å] | 1.560 | 1.560 |
Rpim | 0.065 | 1.013 |
Number of reflections | 372245 | 18514 |
<I/σ(I)> | 6 | |
Completeness [%] | 99.8 | |
Redundancy | 3.8 | |
CC(1/2) | 0.995 | 0.320 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 298 | 0.1 M BIS-TRIS pH 6.5, 28% w/v Polyethylene glycol |