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9NTE

Helix pomatia AMP deaminase (HPAMPD) apoenzyme

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS-II BEAMLINE 17-ID-1
Synchrotron siteNSLS-II
Beamline17-ID-1
Temperature [K]100
Detector technologyPIXEL
Collection date2023-06-01
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.92
Spacegroup nameP 1 21 1
Unit cell lengths76.229, 82.429, 211.423
Unit cell angles90.00, 92.21, 90.00
Refinement procedure
Resolution19.950 - 1.750
R-factor0.1644
Rwork0.163
R-free0.19520
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.010
RMSD bond angle1.091
Data reduction softwareXDS
Data scaling softwareautoPROC
Phasing softwarePHENIX
Refinement softwarePHENIX (1.21.2_5419)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]19.9501.780
High resolution limit [Å]1.7501.750
Rpim0.0750.681
Number of reflections26302013005
<I/σ(I)>6.51.1
Completeness [%]99.8
Redundancy4.4
CC(1/2)0.9780.561
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.52930.1 M BIS-TRIS pH 6.5, 20% w/v Polyethylene glycol monomethyl ether 5,000

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