9NDI
[3,8,9,P-1] Shifted tensegrity triangle with an (arm,center,arm) distribution of (3,8,9) base pairs, 1 nt sticky ends, and 5' phosphates
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-03-19 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.991870 |
Spacegroup name | P 63 |
Unit cell lengths | 133.081, 133.081, 49.815 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 19.960 - 6.390 |
R-factor | 0.1619 |
Rwork | 0.161 |
R-free | 0.16730 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.902 |
Data reduction software | autoPROC |
Data scaling software | STARANISO |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 19.960 | 19.956 | 7.109 |
High resolution limit [Å] | 6.390 | 10.939 | 6.393 |
Number of reflections | 968 | 194 | 194 |
<I/σ(I)> | 6.9 | ||
Completeness [%] | 90.6 | ||
Redundancy | 19.5 | ||
CC(1/2) | 0.992 | 0.991 | 0.046 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 100 mM MOPS, 1.25 M magnesium sulfate |