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9ND8

[T:Ag+/Hg2+:T--(pH8-pH9.5; 95s)] Metal-mediated DNA base pair in tensegrity triangle grown at pH 8 and soaked in pH 9.5 Ag/Hg for 95s

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS-II BEAMLINE 19-ID
Synchrotron siteNSLS-II
Beamline19-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2024-10-05
DetectorDECTRIS EIGER2 X 9M
Wavelength(s)0.97856
Spacegroup nameH 3
Unit cell lengths105.145, 105.145, 91.471
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution19.910 - 5.380
R-factor0.172
Rwork0.169
R-free0.24460
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.010
RMSD bond angle1.229
Data reduction softwareautoPROC
Data scaling softwareSTARANISO
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]19.91019.9106.167
High resolution limit [Å]5.3759.5015.375
Number of reflections2072208208
<I/σ(I)>5.9
Completeness [%]85.9
Redundancy5.5
CC(1/2)0.9940.9930.320
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8293100 mM MOPS, 1.25 M magnesium sulfate

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PDB entries from 2026-01-28

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