9MRV
Crystal structures of a cyanobacterial DAP epimerase bound to D,L-alpha-methyl DAP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08B1-1 |
Synchrotron site | CLSI |
Beamline | 08B1-1 |
Temperature [K] | 93.15 |
Detector technology | PIXEL |
Collection date | 2023-10-25 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.979 |
Spacegroup name | P 1 |
Unit cell lengths | 47.496, 103.878, 103.865 |
Unit cell angles | 61.01, 78.42, 78.62 |
Refinement procedure
Resolution | 46.210 - 1.690 |
R-factor | 0.2017 |
Rwork | 0.202 |
R-free | 0.20450 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.989 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.210 | 46.210 | 1.790 |
High resolution limit [Å] | 1.690 | 5.040 | 1.690 |
Rmerge | 0.034 | 0.017 | 0.334 |
Rmeas | 0.048 | 0.024 | 0.472 |
Number of reflections | 181623 | 3520 | 18843 |
<I/σ(I)> | 10.24 | ||
Completeness [%] | 95.7 | ||
Redundancy | 7.1 | ||
CC(1/2) | 0.999 | 0.999 | 0.838 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 291.15 | 0.15M DL-Malic acid, 20% w/v PEG 3350 |