9MPC
Crystal structure of the HIV V2-apex-targeting antibody RM018 from macaque
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-1 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-08-03 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.920 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 118.702, 118.702, 194.418 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.710 - 3.300 |
R-factor | 0.2547 |
Rwork | 0.249 |
R-free | 0.30730 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.490 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.21.2_5419) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 3.360 |
High resolution limit [Å] | 3.300 | 3.300 |
Number of reflections | 10810 | 519 |
<I/σ(I)> | 7.6 | |
Completeness [%] | 100.0 | |
Redundancy | 15.5 | |
CC(1/2) | 0.997 | 0.618 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.16 M Zinc acetate 0.108 M Sodium cacodylate pH 6.5 14.4% PEG 8000, 20% Glycerol |