9MGL
Crystal structure of PRMT5:MEP50 in complex with MTA and GSK3326595
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-02-09 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.97950 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 99.740, 136.970, 178.890 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.620 - 2.250 |
R-factor | 0.1957 |
Rwork | 0.192 |
R-free | 0.26770 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.013 |
RMSD bond angle | 1.246 |
Data reduction software | XDS |
Data scaling software | STARANISO |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 108.755 | 108.750 | 2.580 |
High resolution limit [Å] | 2.250 | 8.390 | 2.250 |
Rmerge | 0.116 | 0.040 | 1.028 |
Rpim | 0.049 | 0.018 | 0.456 |
Number of reflections | 24898 | 7477 | 7505 |
<I/σ(I)> | 11.3 | 34.1 | 1.8 |
Completeness [%] | 94.3 | 99.8 | 81 |
Redundancy | 6.5 | 6 | 6 |
CC(1/2) | 0.998 | 0.999 | 0.668 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 283 | 35% PEG 3350, 327 mM ammonium sulfate |